Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1739 118 2e-21 >seq1739 Length=117728 Score = 118 bits (130), Expect = 2e-21 Identities = 177/249 (71%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGC-CGCCTCCTTAAGAGTATCATAAATACCCTCAAT 94850 || || |||||||| ||| || || | ||| || |||||||| || || ||||| || Sbjct 52502 CCACCCGCAGTCTTACTGATCATAGCACAACTC-TTGAGAGTATCGTAGATGCCCTCGAT 52560 Query 94851 GCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACA 94910 || |||| | || || ||||||||||| ||||||||| || || || Sbjct 52561 CGAGTCGTCTTTCATGCACACGAGGAAGCACGAACTAAGTTGGGGGTTGGGGGTACCGGC 52620 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 || |||||||| || |||||||| || || ||| || ||||| |||| ||||| || Sbjct 52621 GTTGAACAGTGTAGGTGAAGCATGCGTGAAGTAGCGCTCGGACATTAGATTGTATGTCTC 52680 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 ||||| | ||| || || || |||||||||| |||||||| ||||||| ||| Sbjct 52681 GATGACGCGCTCGATATCCTCGCCATGGATGCCGACAGAGACACGCATGATCATGTGCTG 52740 Query 95031 AGGGCGCTC 95039 |||||||| Sbjct 52741 GGGGCGCTC 52749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989470915597645