Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq2640 89.7 5e-13 >seq2640 Length=24278 Score = 89.7 bits (98), Expect = 5e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 11651 CCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttt 11710 ||||| || | || || ||||| || || || || | |||||||| | || || ||| Sbjct 17588 CCTTCATCACGGCTGATAAGTTCGTTGGAGAAGGTAAGACCGGGCATAAGACCACGCTTT 17529 Query 11711 tttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAAT 11770 || ||||| || |||||||| || || ||||| ||||| || ||||||||||| || || Sbjct 17528 TTCATCCAGAAGATAGCAGCGAAGGAGCCAGAGAAGAAGATACCCTCCACAGCGGCGAAG 17469 Query 11771 GCTACTA 11777 || |||| Sbjct 17468 GCAACTA 17462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468472565341360