Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1717 129 8e-25 seq2640 120 4e-22 >seq1717 Length=72410 Score = 129 bits (142), Expect = 8e-25 Identities = 367/561 (65%), Gaps = 6/561 (1%) Strand=Plus/Minus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| || || || ||| ||||| ||||| || | || || || |||||||| || || Sbjct 62890 CAAGCAAGCAAAGTCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGT 62831 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 || || ||||| ||||||||||| || | ||| || |||| || || || ||||| || Sbjct 62830 AAGACCAGGCATGAGGCCACGCTTCTTCATCCAGAAGATGGCAGCGAAGGAACCAGAGAA 62771 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG--CGC-TGTC 50132 |||||| || || || ||||| |||||||| || | ||| || | | | || |||| Sbjct 62770 GAAGATACCCTCCACAGCGGCGAAGGCAACCAGACGCTCGGCAAAGGTCGATTGCTTGTC 62711 Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192 |||||||| | |||||||| ||||| ||| | || || || || || | || Sbjct 62710 GGAAATCCACTTCAGTGCCCAATCCGCCTTACGTTTGATGCATGGAATAGTCTCGACAGC 62651 Query 50193 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 50252 || || || | | || || || || |||||||| | || || Sbjct 62650 ATCGAACAGTCGGGTACGCTCGGCGGGGTCCCGAATGTATGTATCGATGAGTAGCGAGTA 62591 Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312 | || || || ||||| || || ||||| || |||||||| || | |||||| | Sbjct 62590 TGTCTCTGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCCGC 62531 Query 50313 AATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372 ||| ||||| | | || || || | | || ||||| || || ||||| || Sbjct 62530 TGCCTGAACTTCGTTGGAGAAACGCTCTACGAGGTTCTCATTTACGATACCGTCCGAAGC 62471 Query 50373 TGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATT 50429 ||||| || |||| || || |||||||| |||||| | | || | Sbjct 62470 AGCAAAGAAAGCCAGAACGTGGGAGATAAAATGACGCTCGTTGTCATTCATCCTGTTCGT 62411 Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 50489 ||| || | | ||| ||||| | || | ||||| | ||||| || || || || || Sbjct 62410 CCAGTCGTGCAGATCCTTAGAGAGGTCCATCTCTTCGGCAGTCCAGAAAGAAGCTTCGGC 62351 Query 50490 CTTTTTATACATATTCCAGAT 50510 |||||| ||||| | |||||| Sbjct 62350 CTTTTTGTACATTTGCCAGAT 62330 >seq2640 Length=24278 Score = 120 bits (132), Expect = 4e-22 Identities = 365/561 (65%), Gaps = 6/561 (1%) Strand=Plus/Minus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| || || || ||| ||||| || || || | || || ||||||||||| || || Sbjct 17613 CAAGCAAGCAAAGTCGGTGTGCATGCCTTCATCACGGCTGATAAGTTCGTTGGAGAAGGT 17554 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 || |||||||| || ||||||||||| | ||| || || | || || || ||||| || Sbjct 17553 AAGACCGGGCATAAGACCACGCTTTTTCATCCAGAAGATAGCAGCGAAGGAGCCAGAGAA 17494 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG--CGC-TGTC 50132 |||||| || || || ||||| |||||||| || | ||| || | | | || |||| Sbjct 17493 GAAGATACCCTCCACAGCGGCGAAGGCAACTAGACGCTCGGCAAAGGTTGACTGCTTGTC 17434 Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192 |||||||| | |||||||||||||| || | || || || || || | || Sbjct 17433 GGAAATCCACTTCAGTGCCCAATCGGCCTTACGCTTGATGCATGGAATAGTCTCGACAGC 17374 Query 50193 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 50252 || || || | | || || || || |||||||| | || || Sbjct 17373 ATCGAACAGTCGGGTACGCTCGGCGGGGTCCCGAATGTATGTATCGATGAGTAGCGAGTA 17314 Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312 | || || || ||||| || || ||||| || |||||||| || | |||||| | Sbjct 17313 TGTCTCTGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCCGC 17254 Query 50313 AATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372 || ||||| | | || || ||| | | || ||||| || || ||||| || Sbjct 17253 TGCTTGAACTTCGTTGGAGAAACGCTCAACGAGGTTCTCATTTACGATACCGTCCGAAGC 17194 Query 50373 TGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTAT---T 50429 || || || |||| || || ||||| || ||||||| | | || | | Sbjct 17193 AGCGAAGAAAGCCAGGACGTGAGAGATAAAGTGACGTTCGTTGTCATTCATCTTGTTCGT 17134 Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 50489 ||| || | | || ||||| | || | || || | ||||| || || || || || Sbjct 17133 CCAGTCGTGCAGGTCCTTAGAGAGGTCCATCTCCTCAGCAGTCCAGAAAGAAGCTTCGGC 17074 Query 50490 CTTTTTATACATATTCCAGAT 50510 ||| |||||||| | |||||| Sbjct 17073 CTTCTTATACATTTGCCAGAT 17053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718188722007160