Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1796 98.7 1e-15 seq1723 96.9 4e-15 >seq1796 Length=58898 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||||| || | |||| || || || || || ||||||||||| Sbjct 51496 GCCACCACGCAGACGCAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGA 51555 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| ||||||||||| || || ||| ||||||||||||| ||||| || || Sbjct 51556 AAGAGTGCGACCATCTTCGAGTTGCTTTCCGGCAAAGATCAGACGTTGTTGATCAGGGGG 51615 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || || || || ||| ||| || | | || | ||||| | | ||| || Sbjct 51616 GATACCCTCCTTATCCTGAATCTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCAC 51675 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | ||| | |||||||||||| | || || || || ||||||||| Sbjct 51676 TTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCATA 51724 >seq1723 Length=56463 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||||| ||| | |||| || ||||| || || ||||||||||| Sbjct 44270 CCACCACGCAGACGCAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAA 44211 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||||||||||| || || || ||||||||||||| ||||| || || Sbjct 44210 AGAGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGTTGATCAGGGGGG 44151 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || || || || |||||| || | | || | ||||| | | ||| ||| Sbjct 44150 ATACCCTCCTTATCCTGGATTTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCACT 44091 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | |||||||||||| | || || || || ||||||||| Sbjct 44090 TCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCATA 44043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506957874232080