Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1796 86.0 5e-12 >seq1796 Length=58898 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| |||||||| || || || |||||||| || | | | | |||| || Sbjct 51743 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGCCCGTCCTCA 51802 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || ||||||||| | || | |||||| || ||| ||||| || || ||||| Sbjct 51803 AGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCGGGGGGAATGCCCTCCTTGTCTTGG 51862 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| || | || ||||| ||| || || || | ||| || || || Sbjct 51863 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGACGACTCAACCTCAAGGGTGATAGTCTTG 51922 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||||||||| ||||| || |||||| Sbjct 51923 CCCGTCAGAGTTTTGACAAAGATCTGCATA 51952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362139831007779