Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq953 197 3e-46 >seq953 Length=1916 Score = 197 bits (218), Expect = 3e-46 Identities = 398/590 (67%), Gaps = 3/590 (1%) Strand=Plus/Minus Query 32879 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTTTCCGAT 32938 || |||||||||| || ||||||| | ||||| | || |||| | || ||| Sbjct 1114 TGTAGTGGTCAACTAATTTTGGCCACAGTTTTAGAATCTTGA---TATCTAACCTCAGAT 1058 Query 32939 TCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATATCCAACG 32998 || || || | ||| ||| | ||||| | || ||||| | | |||||||||| Sbjct 1057 TCATTCGGCGCTAAACCAGCATTATAATGATGTGGTCTAACATTATTGTAATATCCGTTT 998 Query 32999 ATATAGTCCGTTATGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCGGCATC 33058 ||||| || | | | || || || ||| || | || || || |||||| Sbjct 997 ATATAATCACTCACACTATATTTAGCGTCTCTAAAGTTTTCATATCCAACTTTTGGCATC 938 Query 33059 CATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCG 33118 ||||| |||| | || || || || ||||||||||| |||||||| ||||||||| Sbjct 937 CATTCCGTCTTAAAGCTTCTAAAAAATCGTTCCATTGGCGCATTATCCCAACAGTTTCCG 878 Query 33119 CGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTC 33178 |||| |||||||| ||| |||| | || ||||| || || || | | | || Sbjct 877 CGCCTACTCATACTTTGTTTGATTTTATAGCGCCATAAACGTTGGCGATATTTCAAACTT 818 Query 33179 GTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCGGGCTTACCACGGGTTTCC 33238 ||||||||||| || || || || ||||||| || || || || | | |||| Sbjct 817 GTATAATGACTACCNTGGTCTGAATGAAACATCAGTCCTGACGGTTTTCCTCTGCTTTCA 758 Query 33239 CATGCCATTTCCAGCGCTTTCATGGTGAGCCTGCTGTCCGGCGAGAACGACATGGCCCAG 33298 | || | ||| |||||||| | || | | | || || || || ||||| ||||| Sbjct 757 TACGCGAGTTCAAGCGCTTTTAATGTTAAATTAGTATCTGGTGACAATGACATCGCCCAA 698 Query 33299 CCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGCTTACCC 33358 || ||| ||| | ||| || | || | ||| ||||| | || ||||| || || || Sbjct 697 CCAACTACTTTGCGTGCAAATAAATCAATAACGACGGCTAAATAGGCCCAACGATTGCCT 638 Query 33359 GTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCACGGCGAACTGC 33418 ||||| ||||| ||||||||||||||||| || || |||||| || | ||||| Sbjct 637 GTCCAAATATACGTCACATCACCGCACCATACGGTATCTGGCTCAACAACATCAAACTGT 578 Query 33419 CTTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCACGTTTATA 33468 || || || ||| ||||| ||| ||| |||| |||||| | |||||| Sbjct 577 CTATCGAGCAGGTTTGGGATTTCAAGATGCTCATTACCACCCCTTTTATA 528 Score = 138 bits (152), Expect = 3e-28 Identities = 112/136 (82%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33752 ATTATCGAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTT 33811 |||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||| | Sbjct 238 ATTAACGAGAATTGTTCAGGGAGTCGGACATCAAGAGAGCGGTAGCCTTTTTTAATATAT 179 Query 33812 CATTCTCCATTTCAATGCGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTGTTCCG 33871 | || || | |||||||||||| | | || | |||||||| |||||||||||||| | Sbjct 178 CCTTTTCTAATTCAATGCGTTGGATTTGNTTTTTAAGCTCACGAATTTCAATTTGTTCGG 119 Query 33872 GGGTAATGGGGGAGGC 33887 | || || || || || Sbjct 118 GTGTCATTGGTGATGC 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124802780347390