Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1717 122 1e-22 seq2640 111 2e-19 >seq1717 Length=72410 Score = 122 bits (134), Expect = 1e-22 Identities = 367/564 (65%), Gaps = 12/564 (2%) Strand=Plus/Minus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 ||| || || || ||| ||||| ||||| || | || || || |||||||| || || Sbjct 62890 CAAGCAAGCAAAGTCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGT 62831 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 || || ||||| ||||||||||| || | ||| || |||| |||||| || ||||| || Sbjct 62830 AAGACCAGGCATGAGGCCACGCTTCTTCATCCAGAAGATGGCAGCGAAGGAACCAGAGAA 62771 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG 33479 |||||| || || || || || ||||||| || | ||| | || | || | | || Sbjct 62770 GAAGATACCCTCCACAGCGGCGAAGGCAACCAGACGCTCGGC--AAAGGTCGATTGCTTG 62713 Query 33480 T-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33534 | |||||||| | |||||||| ||||| ||| | || || || || || | Sbjct 62712 TCGGAAATCCACTTCAGTGCCCAATCCGCCTTACGTTTGATGCATGGAATAGTCTCGACA 62653 Query 33535 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA 33594 |||| || || | | || || || || |||||||| | || Sbjct 62652 GCATCGAACAGTCGGGTACGCTCGGCGGGGTCCCGAATGTATGTATCGATGAGTAGCGAG 62593 Query 33595 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 33654 || | || || || ||||| || || ||||| || |||||||| || | |||||| Sbjct 62592 TATGTCTCTGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCC 62533 Query 33655 GTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTG 33714 | ||| ||||| | | || || || | | || ||||| || || ||||| Sbjct 62532 GCTGCCTGAACTTCGTTGGAGAAACGCTCTACGAGGTTCTCATTTACGATACCGTCCGAA 62473 Query 33715 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT----TT 33770 || ||||| || |||| || || ||||||| |||| || || | || Sbjct 62472 GCAGCAAAGAAAGCCAGAACGTGGGAGATAAAATGACGCTCGT-TGTCATTCATCCTGTT 62414 Query 33771 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTC 33830 |||| || | | ||| ||||| | || | ||||| | ||||| || || || || Sbjct 62413 CGTCCAGTCGTGCAGATCCTTAGAGAGGTCCATCTCTTCGGCAGTCCAGAAAGAAGCTTC 62354 Query 33831 TGCCTTTTTATACATGTTCCAGAT 33854 |||||||| ||||| | |||||| Sbjct 62353 GGCCTTTTTGTACATTTGCCAGAT 62330 >seq2640 Length=24278 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 ||| || || || ||| ||||| || || || | || || ||||||||||| || || Sbjct 17613 CAAGCAAGCAAAGTCGGTGTGCATGCCTTCATCACGGCTGATAAGTTCGTTGGAGAAGGT 17554 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 || |||||||| || ||||||||||| | ||| || || | |||||| || ||||| || Sbjct 17553 AAGACCGGGCATAAGACCACGCTTTTTCATCCAGAAGATAGCAGCGAAGGAGCCAGAGAA 17494 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG--CGC-TGTC 33476 |||||| || || || || || ||||||| || | ||| || | | || |||| Sbjct 17493 GAAGATACCCTCCACAGCGGCGAAGGCAACTAGACGCTCGGCAAAGGTTGACTGCTTGTC 17434 Query 33477 ATGTATCCACTTTTGAGCCCAATCGGCCTT 33506 |||||||| | |||||||||||||| Sbjct 17433 GGAAATCCACTTCAGTGCCCAATCGGCCTT 17404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622877749174040