Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1796 91.5 1e-13 seq1723 91.5 1e-13 >seq1796 Length=58898 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | || || || ||||||| ||||| | |||||| | Sbjct 51723 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACGATCACTCTCGAAGTGGAATCATCC 51664 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || ||||||| || || || || || || || |||||| Sbjct 51663 GACACCATCGATAACGTTAAGGCAAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAA 51604 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | | ||| || ||||||||||||| | | | | || || ||| Sbjct 51603 CAACGTCTGATCTTTGCCGGAAAGCAACTCGAAGATGGTCGCACTCTTTCGGATTACAAC 51544 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 || || || || || || | || || |||||| Sbjct 51543 ATCCAGAAGGAGTCCACCCTTCACCTCGTCCTG 51511 >seq1723 Length=56463 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | || || || |||||||| ||||| | |||||| | Sbjct 44044 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACGATCACCCTCGAAGTGGAATCATCC 44103 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || ||| || || || || || || || || |||||| Sbjct 44104 GACACCATCGATAACGTTAAGGCAAAAATCCAGGATAAGGAGGGTATCCCCCCTGATCAA 44163 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | || ||| || ||||||||||||| | | | | || || ||| Sbjct 44164 CAACGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACTCTTTCGGATTACAAC 44223 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 || || || ||||| || | || || || ||| Sbjct 44224 ATCCAGAAGGAATCCACCCTTCACCTCGTTCTG 44256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478609035125680