Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1739 96.9 9e-15 seq2085 93.3 1e-13 >seq1739 Length=117728 Score = 96.9 bits (106), Expect = 9e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 || || || ||||| | || |||||| | || | | ||| || || | |||||| Sbjct 52392 GGTTATTCAAATGGTATCGTCCCCATGTTACGAGCATATGATGCCACCGCTCGTTACGTC 52333 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 ||||||||||| || || || ||||||||||| || |||||||| || | Sbjct 52332 GACCAGGGTGGCAATAAACGTCCCGGAGCGTTTGCTATCTACCTCGAGCCATGGCACGAT 52273 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAATTGCGTGCACG 363932 || || |||||||| || || || |||| || ||| || || ||| || ||||||| || Sbjct 52272 GACATCTTTGAGTTCCTCGACCTGAGGAAGAATCAC-GGCAAGGAGCAACTGCGTGCCCG 52214 Query 363933 TGATCTGTTCTATGCACTTTGGGTTTCTGA 363962 |||| |||||||||| || ||| | | ||| Sbjct 52213 TGATTTGTTCTATGCTCTCTGGATCTGTGA 52184 >seq2085 Length=44481 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 || ||||| || || | || |||||||| || | | ||| ||||| | |||||| Sbjct 23826 GGTTACTCAAACGGCATCGTCCCCATGCTACGAGCATATGATGCCACTGCTCGTTACGTC 23767 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 |||||||| || ||||| || ||||||||||| || || ||||| || | Sbjct 23766 GACCAGGGCGGCAACAAGCGTCCCGGAGCGTTTGCTATCTACCTTGAGCCATGGCACGAT 23707 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933 || || || ||||| || || | |||| || || |||||| || | ||||| ||| Sbjct 23706 GACATCTTCGAGTTCCTCGACTTGAGGAAGAATCATGGCAAAGAGCAACTACGTGCCCGT 23647 Query 363934 GATCTGTTCTATGCACTTTGGGTTTCTGA 363962 ||| |||||||||| || ||| | ||||| Sbjct 23646 GATTTGTTCTATGCTCTCTGGATCTCTGA 23618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303204659674658