Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1796 122 8e-23 seq557 116 3e-21 seq2472 89.7 5e-13 seq3251 86.0 6e-12 seq2186 86.0 6e-12 seq1723 86.0 6e-12 >seq1796 Length=58898 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||| | ||| |||||||| || |||||||| || | Sbjct 51725 CCACCACGGAGACGAAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 51784 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| |||||| ||||||||||| ||| |||| | ||| ||||| || || || Sbjct 51785 AAGGTACGCCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCGGGGGGA 51844 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 51845 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGACGACTCAACC 51904 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || |||||||| || || |||||||| Sbjct 51905 TCAAGGGTGATAGTCTTGCCCGTCAGAGTTTTGACAAAGATCTGCAT 51951 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||| ||||| ||||||||||| || || || || |||||| |||||||| || Sbjct 51299 GTCGATTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCGTCCTCAAGCTGCTTTCCG 51358 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || | ||||||||||| ||||| || || || || || ||| || |||| Sbjct 51359 GCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTGGCCTTG 51418 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | ||||||| || | |||| || ||||| || || ||| Sbjct 51419 ACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTACCCGTGAGGGTT 51478 Query 131218 TTTACGAAAATCTGCATG 131235 || || || || |||||| Sbjct 51479 TTGACAAATATTTGCATG 51496 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||| || || || | ||| |||||||| || |||||||| || || Sbjct 51953 CCACCACGAAGACGCAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTG 52012 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | || || ||||| ||||| Sbjct 52013 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGTTGGTCAGGAGGA 52072 Query 131128 AT 131129 || Sbjct 52073 AT 52074 >seq557 Length=42797 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || ||||| |||||| | ||||| |||||| ||||||||||| ||| | Sbjct 23708 CTCCTTCTGGATGTTATAATCGGAGAGTGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAA 23767 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | |||||| ||||| || || || || || ||||| ||| ||| ||| | | Sbjct 23768 GATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCTTGGATCTTCGCCTTAACATT 23827 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || |||| |||||||| || | ||||| ||| ||||| || || || || || Sbjct 23828 ATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTGAGGGTCTTGAC 23887 Query 131223 GAAAATCTGCAT 131234 ||| |||||||| Sbjct 23888 GAAGATCTGCAT 23899 Score = 89.7 bits (98), Expect = 5e-13 Identities = 162/233 (70%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || |||||||| || ||||||||||| Sbjct 23901 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 23960 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGA--- 131124 | ||||| ||| || ||||||||||| || |||| | ||| |||||||| ||| Sbjct 23961 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGACGG 24020 Query 131125 GGGATTC-CTTCTTTGTCGGTGATTTTCTG--CTTGAGCTGCTCCACAGTATCGGTGGAC 131181 |||| | | || ||||| ||| |||| ||| | | || | || |||| |||| Sbjct 24021 GGGANNCGCCTCCTTGTC-TTGA---TCTGGCCTTCACGTTGTCGATCGTGTCGGAGGAC 24076 Query 131182 TCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || | ||| || || || ||||| || || || |||||||| Sbjct 24077 TCGACCTCGAGCGTGATGGTCTTGCCCGTGAGAGTCTTGACAAAGATCTGCAT 24129 >seq2472 Length=20097 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||| |||||||| || |||||||| ||| Sbjct 92 CCACCACGGAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 151 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| || |||||||| || |||||| Sbjct 152 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGAGGG 211 Query 131128 AT 131129 || Sbjct 212 AT 213 >seq3251 Length=9849 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | ||| || |||||||| |||||||| ||||| Sbjct 7555 CCACCACGAAGACGGAGCACAAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGCTG 7496 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| ||| |||| | ||||||||||| || || Sbjct 7495 AGAGTGCGTCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 7436 Query 131128 AT 131129 || Sbjct 7435 AT 7434 >seq2186 Length=87839 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | || || ||||| || |||||||| ||||| Sbjct 62869 CCACCACGAAGACGGAGCACAAGGTGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGCTG 62928 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 62929 AGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 62988 Query 131128 AT 131129 || Sbjct 62989 AT 62990 >seq1723 Length=56463 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||| ||||| || | || |||||||| || ||||| || || || Sbjct 43814 CCACCGCGGAGACGCAAAACTAAGTGAAGAGTGGACTCCTTCTGGATGTTATAGTCACTG 43755 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || |||||| || || ||||| ||||| Sbjct 43754 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATTAGGCGTTGTTGGTCAGGAGGA 43695 Query 131128 AT 131129 || Sbjct 43694 AT 43693 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| ||||||||||| || || || || ||||| |||||||| || Sbjct 44468 GTCGACTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCATCCTCAAGCTGCTTTCCG 44409 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || | ||||||||||| ||||| || || || || || ||| || ||| Sbjct 44408 GCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTGGCCTTC 44349 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | ||||||| || | || | ||| ||||| || || || Sbjct 44348 ACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTACCCGTGAGGGTC 44289 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| || ||||| Sbjct 44288 TTGACGAATATTTGCAT 44272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471960176472960