Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1717 185 1e-41 seq2640 154 2e-32 >seq1717 Length=72410 Score = 185 bits (204), Expect = 1e-41 Identities = 383/568 (67%), Gaps = 19/568 (3%) Strand=Plus/Minus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 ||||| ||||||||||| || | || || || || || | ||| ||| ||| || Sbjct 62889 AAGCAAGCAAAGTCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTA 62830 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 | ||| || | || || || ||||| | ||| || || | ||| || |||||| || Sbjct 62829 AGACCAGGCATGAGGCCACGCTTCTTCATCCAGAAGATGGCAGCGAAGGAACCAGAGAAG 62770 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268 || ||||| ||||| || || || || || | ||| |||||||| | | ||| || Sbjct 62769 AAGATACCCTCCACAGCGGCGAAGGCAACCAGACGCTCGGCAAAGGTCG----ATTGCTT 62714 Query 93269 CTG----ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGAT 93324 | ||||| || | |||||||| || || || || || || | || |||| Sbjct 62713 GTCGGAAATCCACTTCAGTGCCCAATCCGCCTTACGTTTGATGCATGGAATAGTCTCGAC 62654 Query 93325 AGCGTTAAATAG----GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACA 93380 ||| | || || ||| |||||| | | || || |||||||||||||| | | Sbjct 62653 AGCATCGAACAGTCGGGTA----CGCTCGGCGGGGTCCCGAATGTATGTATCGATGAGTA 62598 Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440 | || || | || || |||| |||||||| || ||||| |||||||| || | || Sbjct 62597 GCGAGTATGTCTCTGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAG 62538 Query 93441 CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCAT 93500 | |||| ||| ||||| | || || | ||||||||| || ||||| || ||||| | Sbjct 62537 CCTCCGCTGCCTGAACTTCGTTGGAGAAACGCTCTACGAGGTTCTCATTTACGATACCGT 62478 Query 93501 CGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC- 93559 | || || ||||| ||||||| | || |||||||| ||| | || || | | Sbjct 62477 CCGAAGCAGCAAAGAAAGCCAGAACGTGGGAGATAAAATGACGCTCGTTGTCATTCATCC 62418 Query 93560 --TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATG 93617 || ||| ||| ||||| || || || || | |||||| ||||||| || || | Sbjct 62417 TGTTCGTCCAGTCGTGCAGATCCTTAGAGAGGTCCATCTCTTCGGCAGTCCAGAAAGAAG 62358 Query 93618 CTTCTGCTTTTTTGTACATATCCCATAT 93645 |||| || ||||||||||| | ||| || Sbjct 62357 CTTCGGCCTTTTTGTACATTTGCCAGAT 62330 >seq2640 Length=24278 Score = 154 bits (170), Expect = 2e-32 Identities = 378/567 (67%), Gaps = 17/567 (3%) Strand=Plus/Minus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCG--TGATATCAACTCATTGCTGAATG 93146 ||||| ||||||||||| || | ||||| || || ||||| | || ||| ||| | Sbjct 17612 AAGCAAGCAAAGTCGGTGTGCATGCCTTCATCACGGCTGATA--AGTTCGTTGGAGAAGG 17555 Query 93147 TTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaa 93206 | | ||| || | || || || || || | ||| || || | ||| || ||||| | Sbjct 17554 TAAGACCGGGCATAAGACCACGCTTTTTCATCCAGAAGATAGCAGCGAAGGAGCCAGAGA 17495 Query 93207 aaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTAC 93266 | || ||||| ||||| || || || || || | ||| |||||||| ||| || Sbjct 17494 AGAAGATACCCTCCACAGCGGCGAAGGCAACTAGACGCTCGGCAAAGGTTGACTGCTTGT 17435 Query 93267 TGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG 93326 | ||||| || | ||||||||||| || ||| || || || | || |||| || Sbjct 17434 CGGAAATCCACTTCAGTGCCCAATCGGCCTTACGCTTGATGCATGGAATAGTCTCGACAG 17375 Query 93327 CGTTAAATAG----GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGA 93382 | | || || ||| |||||| | | || || |||||||||||||| | || Sbjct 17374 CATCGAACAGTCGGGTA----CGCTCGGCGGGGTCCCGAATGTATGTATCGATGAGTAGC 17319 Query 93383 GAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCT 93442 || || | || || |||| |||||||| || ||||| |||||||| || | ||| Sbjct 17318 GAGTATGTCTCTGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCC 17259 Query 93443 TCCG-TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501 |||| || | || ||||| | || || | ||| ||||| || ||||| || ||||| || Sbjct 17258 TCCGCTGCT-TGAACTTCGTTGGAGAAACGCTCAACGAGGTTCTCATTTACGATACCGTC 17200 Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTT 93561 || || || || ||||||| | || ||||| || || | || || | ||| Sbjct 17199 CGAAGCAGCGAAGAAAGCCAGGACGTGAGAGATAAAGTGACGTTCGTTGTCATTCATCTT 17140 Query 93562 AT---CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618 | ||| ||| || || || || || || | || || ||||||| || || || Sbjct 17139 GTTCGTCCAGTCGTGCAGGTCCTTAGAGAGGTCCATCTCCTCAGCAGTCCAGAAAGAAGC 17080 Query 93619 TTCTGCTTTTTTGTACATATCCCATAT 93645 ||| || || || ||||| | ||| || Sbjct 17079 TTCGGCCTTCTTATACATTTGCCAGAT 17053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556798716981560