Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1587 120 6e-22 seq1909 87.8 4e-12 seq2216 86.0 1e-11 >seq1587 Length=67671 Score = 120 bits (132), Expect = 6e-22 Identities = 190/267 (71%), Gaps = 8/267 (3%) Strand=Plus/Minus Query 218743 GCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGT 218802 || || |||||||| ||||| ||||| ||||| | || || ||||||||||| || ||| Sbjct 9784 GCGCAAGACTATGTTGGCAGCAACAATCTGAACCTCCTCCTTCCCAACGGTCAATTCGGT 9725 Query 218803 TCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCG 218862 | || | ||| || || || || | | ||||||||||| || || ||| Sbjct 9724 ACGCGCTCCTCGGGCGGTAAAGACCACGCCGCGCCAAGGTATATCTTCACGGAGACGTCA 9665 Query 218863 CC-CGTG-ACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGG 218920 || | || |||||| | | ||| ||| |||||||||| ||||| ||||| || ||| Sbjct 9664 CCGCTTGCACGCGCTA--TTTTCCATCCGGCCGATGATCCACTCCTCAAGTACCTGAAGG 9607 Query 218921 ACGAT--GGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGT 218978 | ||| | ||| ||| ||||| |||| ||| |||| | ||| ||| || ||||||| Sbjct 9606 ATGATAACGATCT--GATCGAGCCGGAGTATTATATGCCGGTTATCCCGCTTGTGCTCGT 9549 Query 218979 AAATGGTGCCAATGGTATCGGGACAGG 219005 || ||||| ||||||| || || || Sbjct 9548 CAACGGTGCTGATGGTATTGGAACTGG 9522 >seq1909 Length=48186 Score = 87.8 bits (96), Expect = 4e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 || || |||||||||||||||||||| || ||| | |||||||| || | | || || Sbjct 29026 CTTTCTGGTGGTTGGAAGATGAAGCTCGCGCTCGCCCGCGCCATGCTGTTCAGAGCTGAC 29085 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 ||||||| ||||||||||| |||||||| | || | ||||| || ||||| | | Sbjct 29086 ATCCTACTCCTTGATGAGCCCACCAACCATCTTGATGTCGTTAACGTTGCTTGGCTCGAG 29145 Query 279825 TCCTACCT 279832 |||||| Sbjct 29146 AACTACCT 29153 >seq2216 Length=38458 Score = 86.0 bits (94), Expect = 1e-11 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 ||| || || || || |||| | ||||| || || ||||||| |||||| |||| || Sbjct 20778 AGGCGAAGACCTTTGCAACTGCCAGTTCTCCCTTGCCTATGGTGCCAAGATTTTGCTCAA 20837 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | || || |||| | |||||||||| |||| ||||||||| ||| || || | Sbjct 20838 CACTGCCACCCTCCGCCTCAAGCGTGGACACCGTTATGGTCTCTGCGGCAAGAACGGTAC 20897 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCC-TAACG 279522 || ||| || || ||||||||||| | ||||| || | || || || || | | Sbjct 20898 CGGAAAGTCTACGCTCATGCGCGCCATCACCAACGGCCAAGTCGAGGGCTTCCCGTCTCC 20957 Query 279523 CATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 | | || || | || | || || ||||||||||||||| Sbjct 20958 CGAC-GAAGTCCGTACCTTTTACGTTGAGCACGACATCGAC 20997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027719344270879