Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1796 118 9e-22 seq1723 113 4e-20 seq2729 100 2e-16 seq557 93.3 4e-14 >seq1796 Length=58898 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||| | || || || || || |||||||| || Sbjct 51722 ATACCACCACGGAGACGAAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 51781 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| || ||||| || || |||||| |||||||||| || || || || Sbjct 51782 GACAAGGTACGCCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCGGGG 51841 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | |||| |||||||| || || Sbjct 51842 GGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGACGACTCA 51901 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| ||||||||||| ||||| |||||||| Sbjct 51902 ACCTCAAGGGTGATAGTCTTGCCCGTCAGAGTTTTGACAAAGATCTGCAT 51951 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | || || | || | || || || || || ||||||||||| Sbjct 51494 ATGCCACCACGCAGACGCAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCC 51553 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| |||||| ||||| || || || |||| ||||| ||||| || || Sbjct 51554 GAAAGAGTGCGACCATCTTCGAGTTGCTTTCCGGCAAAGATCAGACGTTGTTGATCAGGG 51613 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || || || ||||||| || | | || | |||||||| ||||| Sbjct 51614 GGGATACCCTCCTTATCCTGAATCTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCC 51673 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| |||||||| || || || ||||| || ||||| Sbjct 51674 ACTTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 51723 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || ||||||||||| || || |||||| || ||||| || || || Sbjct 51299 GTCGATTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCGTCCTCAAGCTGCTTTCCG 51358 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | ||||| ||||| ||||| |||||||| || || || || ||||| || Sbjct 51359 GCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTGGCCTTG 51418 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | || ||||| |||| || | || || || || || ||| Sbjct 51419 ACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTACCCGTGAGGGTT 51478 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| || |||||| Sbjct 51479 TTGACAAATATTTGCATG 51496 >seq1723 Length=56463 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || ||| | || | || ||||| || || ||||||||||| Sbjct 44273 ATACCACCACGCAGACGCAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCC 44214 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| |||||| ||||| || || ||| |||| ||||| ||||| || || Sbjct 44213 GAAAGAGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGTTGATCAGGG 44154 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 || || || || || || || ||||| ||| | | || | |||||||| ||||| Sbjct 44153 GGGATACCCTCCTTATCCTGGAT-TTTTGCCTTAACGTTATCGATGGTGTCGGATGATTC 44095 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | ||| |||||||| || || || ||||| || ||||| Sbjct 44094 CACTTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 44044 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || ||||| | || || || || || ||||| || || Sbjct 44045 ATACCACCGCGGAGACGAAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCA 43986 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| || || || || || |||||| | ||||||||||| || || || Sbjct 43985 GACAAGGTACGCCCGTCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGATCGGGG 43926 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | |||| |||||||| || ||| Sbjct 43925 GGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCGGACGACTCG 43866 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| |||||||| || || || |||||||| Sbjct 43865 ACCTCAAGGGTAATAGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 43816 >seq2729 Length=38494 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 || ||||| || || |||||| ||||||||||||||||||| || ||||| ||||| ||| Sbjct 316 TCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCGGGGGGAATACCTTCCTTG 257 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || ||||| || | | || | ||||| | ||| ||||| |||| ||| | | Sbjct 256 TCCTGGATCTTCGCCTTGACATTATCGATCGTGTCAGAGGACTCGACCTCCAGGGTGATC 197 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || ||||| || || || |||||||| Sbjct 196 GTCTTACCCGTGAGAGTCTTGACGAAGATCTGCAT 162 >seq557 Length=42797 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || ||||| |||||| | || ||| || ||||| || || || ||| || Sbjct 23709 TCCTTCTGGATGTTATAATCGGAGAGTGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAG 23768 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 ||||||||||||||||| || ||||| || || ||||| ||||| || | | Sbjct 23769 ATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCTTGGATCTTCGCCTTAACATTA 23828 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||||| ||| ||||| |||| ||| | || || || || || || || || Sbjct 23829 TCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 23888 Query 114372 AAAATCTGCAT 114382 || |||||||| Sbjct 23889 AAGATCTGCAT 23899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420088731259428