Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1723 161 2e-34 seq1796 145 2e-29 seq2729 143 6e-29 seq557 120 7e-22 seq1717 116 9e-21 seq2640 107 5e-18 seq5794 84.2 5e-11 seq2790 84.2 5e-11 >seq1723 Length=56463 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| |||| ||| ||| || ||||| || || || | Sbjct 44270 CCACCACGCAGACGCAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAA 44211 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| ||||| |||||||||||||| |||||| | ||| Sbjct 44210 AGAGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGTTGATCAGGGGGG 44151 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || |||||||||||||| || || ||||| || || | ||| ||||| ||| Sbjct 44150 ATACCCTCCTTATCCTGGATTTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCACT 44091 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||||||||| ||||| || ||||| || || || ||||| Sbjct 44090 TCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 44044 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| || | ||| | ||| || || ||||| |||||||| | Sbjct 44042 CCACCGCGGAGACGAAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAC 43983 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || ||||| || | || ||||| ||||| || |||||||| ||| || ||| Sbjct 43982 AAGGTACGCCCGTCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGA---TCGGGG 43926 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || ||||| || || || ||||| || || | ||| ||| || Sbjct 43925 GGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCGGACGACTCG 43866 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| || ||||||||||||||||| |||||||| Sbjct 43865 ACCTCAAGGGTAATAGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 43816 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| | ||||| || || || || | || ||||| ||||| Sbjct 44462 TCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCATCCTCAAGCTGCTTTCCGGCGAAA 44403 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || || || || || ||||||||||| || || |||||||| Sbjct 44402 ATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTGGCCTTCACGTTG 44343 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || | |||||| ||||| || || || ||||||||| Sbjct 44342 TCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGACG 44283 Query 288463 AATATCTGCAT 288473 ||||| ||||| Sbjct 44282 AATATTTGCAT 44272 >seq1796 Length=58898 Score = 145 bits (160), Expect = 2e-29 Identities = 172/232 (74%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || ||||| |||| ||| || || ||||| || || | Sbjct 51493 CATG-CCACCACGCAGACGCAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAAT 51551 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || ||||| || ||||| | ||| ||||| || ||||||||||| |||||| | Sbjct 51552 CCGAAAGAGTGCGACCATCTTCGAGTTGCTTTCCGGCAAAGATCAGACGTTGTTGATCAG 51611 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || |||||||| || || || || ||||| || || | ||| |||| Sbjct 51612 GGGGGATACCCTCCTTATCCTGAATCTTTGCCTTAACGTTATCGATGGTGTCGGATGATT 51671 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | |||||||| ||||||||||| ||||| || ||||| || || || ||||| Sbjct 51672 CCACTTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 51723 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 ||||||| || ||| || || || || ||||| | ||||| || ||||| || | Sbjct 51290 AGATGAAGAGTCGATTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCGTCCTCAAGC 51349 Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || ||||| ||||| || || ||||| || || || || || ||||||||||| Sbjct 51350 TGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATC 51409 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || || || ||||| || || | || || || || || | ||| || ||||| || Sbjct 51410 TTGGCCTTGACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTACCC 51469 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| Sbjct 51470 GTGAGGGTTTTGACAAATATTTGCAT 51495 >seq2729 Length=38494 Score = 143 bits (158), Expect = 6e-29 Identities = 156/206 (76%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| || || || || |||||||| ||||| | ||||||||| ||||| || | || Sbjct 364 TGAAGGGTACTCTCCTTCTGGATATTGTAGTCAGAGAGCGTGCGACCGTCCTCAAGCTGC 305 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATT 288387 ||||| |||||||| ||||||||||| || ||| || ||||| || |||||||| Sbjct 304 TTTCCAGCGAAGATGAGACGCTGTTGG---TCGGGGGGAATACCTTCCTTGTCCTGGATC 248 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 ||||| || || || || || | || || || || || || ||||||||||| || Sbjct 247 TTCGCCTTGACATTATCGATCGTGTCAGAGGACTCGACCTCCAGGGTGATCGTCTTACCC 188 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| |||||||| Sbjct 187 GTGAGAGTCTTGACGAAGATCTGCAT 162 >seq557 Length=42797 Score = 120 bits (132), Expect = 7e-22 Identities = 151/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||||| || || ||||| ||||| |||| ||| ||||| ||||| || | || Sbjct 23697 TGAAGGGTGCTCTCCTTCTGGATGTTATAATCGGAGAGTGTGCGACCGTCCTCAAGCTGC 23756 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATT 288387 || || |||||||| ||||||||||| || ||| || || || || || ||||| Sbjct 23757 TTGCCGGCGAAGATGAGACGCTGTTG---GTCGGGGGGAATACCCTCCTTGTCTTGGATC 23813 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 ||||| || || || || || | ||| || || || || || || || ||||| || Sbjct 23814 TTCGCCTTAACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTACCC 23873 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| |||||||| Sbjct 23874 GTGAGGGTCTTGACGAAGATCTGCAT 23899 Score = 100 bits (110), Expect = 7e-16 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| ||| || || ||||| || || || | Sbjct 23901 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 23960 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGA---GAATCT 288363 || ||||| |||||||| | || || || || ||||| ||||| || || | | Sbjct 23961 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGACGG 24020 Query 288364 GGGATTC-CTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 |||| | | || || || || | | || |||||||| || || | ||| || || Sbjct 24021 GGGANNCGCCTCCTTGTCTTGA--TCTGGCCTTCACGTTGTCGATCGTGTCGGAGGACTC 24078 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||| ||||| || || ||||||||||| || |||||||| Sbjct 24079 GACCTCGAGCGTGATGGTCTTGCCCGTGAGAGTCTTGACAAAGATCTGCAT 24129 >seq1717 Length=72410 Score = 116 bits (128), Expect = 9e-21 Identities = 123/162 (76%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| |||||||| ||| ||||| ||||||||||| ||||| ||| | || Sbjct 63052 ATCGGCATGAACGCCGATCTGATGTGCCAATACATCGAATTCGTTGCTGACCGTCTACTC 63111 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 | | || ||| | || ||| ||||| || | || ||||||| ||| ||||| | Sbjct 63112 ATCTCTCTGGGTAACGACAAATACTACAACTCAACCAACCCCTTCGACTTCATGGACATG 63171 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTC 269313 |||||||| |||| ||||| ||||||||||| ||||| ||| Sbjct 63172 ATTTCGCTTCAAGGCAAGACAAACTTCTTCGAGAAGCGCGTC 63213 >seq2640 Length=24278 Score = 107 bits (118), Expect = 5e-18 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| |||||||||||| || || ||||| ||||| ||||| ||| | || Sbjct 17775 ATCGGCATGAACGCCGATCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGTCTACTC 17834 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 | | || || | || ||| ||||| || | || ||||||| ||||||||| | Sbjct 17835 ATCTCTCTGGGCAACGACAAATATTACAACTCAACCAACCCCTTCGACTTTATGGACATG 17894 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTC 269313 || ||||| |||| ||||| ||||||||||| ||||| ||| Sbjct 17895 ATCTCGCTTCAAGGGAAGACAAACTTCTTCGAGAAGCGCGTC 17936 >seq5794 Length=685 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || |||||||| || ||||| || || || || | ||| || || || || Sbjct 137 CCTTCCTTGTCCTGGATCTTGGCTTTAACATTGTCGATGGTGTCGGAAGACTCCACCTCA 78 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || || ||||||||||| |||||||| Sbjct 77 AGGGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 34 >seq2790 Length=23748 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || |||||||| || ||||| || || || || | ||| || || || || Sbjct 8603 CCTTCCTTGTCCTGGATCTTGGCTTTAACATTGTCGATGGTGTCGGAAGACTCCACCTCA 8662 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || || ||||||||||| |||||||| Sbjct 8663 AGGGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 8706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179519595362082