Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2640 136 9e-27 seq1717 132 1e-25 >seq2640 Length=24278 Score = 136 bits (150), Expect = 9e-27 Identities = 134/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||||| ||||||||| | || |||||| | ||||||||||| ||||| || ||||| | Sbjct 17772 CTTATCGGCATGAACGCCGATCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGTCTA 17831 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 ||||| | || || | || ||| |||||||| | |||||||| | ||||||||| Sbjct 17832 CTCATCTCTCTGGGCAACGACAAATATTACAACTCAACCAACCCCTTCGACTTTATGGAC 17891 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTA 243734 | || |||||||||||||| || ||||||||||| ||||| ||| ||||| Sbjct 17892 ATGATCTCGCTTCAAGGGAAGACAAACTTCTTCGAGAAGCGCGTCTCGGATTA 17944 >seq1717 Length=72410 Score = 132 bits (146), Expect = 1e-25 Identities = 133/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||||| ||||||||| | || || ||| | || |||||||||||||| || ||||| | Sbjct 63049 CTTATCGGCATGAACGCCGATCTGATGTGCCAATACATCGAATTCGTTGCTGACCGTCTA 63108 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 ||||| | || ||| | || ||| |||||||| | |||||||| | ||| ||||| Sbjct 63109 CTCATCTCTCTGGGTAACGACAAATACTACAACTCAACCAACCCCTTCGACTTCATGGAC 63168 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTA 243734 | |||||||||||||| || || ||||||||||| ||||| ||| ||||| Sbjct 63169 ATGATTTCGCTTCAAGGCAAGACAAACTTCTTCGAGAAGCGCGTCTCGGATTA 63221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102753968732650