Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1717 136 5e-27 seq2640 134 2e-26 seq1739 100 3e-16 >seq1717 Length=72410 Score = 136 bits (150), Expect = 5e-27 Identities = 347/522 (66%), Gaps = 11/522 (2%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | ||||| |||||| |||||| || || ||||| || || Sbjct 62883 GCAAAGTCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTAAGACCA 62824 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 |||||||| || |||||||||| |||||| || ||| || ||||| ||||||||||| Sbjct 62823 GGCATGAGGCCACGCTTCTTCATCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATA 62764 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCA 126223 ||||||||| ||||| |||| |||||||| ||||||| ||| | |||| | | Sbjct 62763 CCCTCCACAGCGGCGAAGGCAACCAGACGCTCGGCAAAGG---TCGATTGCTTGTCGGAA 62707 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | |||||||| ||||| | |||||| | ||| || || | |||| || || || Sbjct 62706 ATCCACTTCAGTGCCCAATCCGCCTTACGTTTGATGCATGGAATAGTCTCGACAGCATCG 62647 Query 126284 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 126343 || ||| | || | || || ||||| |||| |||||| || ||||| Sbjct 62646 AACAGTCGGGTACGCTCGGCGGGGTCCCGAATGTATGTATCGATGAGTAGCGAGTATGTC 62587 Query 126344 TCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 126402 || ||||| | | ||| || | ||| | ||||||| | || || || | Sbjct 62586 TCTGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAACGAGCCTCCGCTGC 62528 Query 126403 CTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 126462 ||| || || | || ||| | || |||||| || || || || || |||| Sbjct 62527 CTGAACTTCGTTGGAGAAACGCTCTACGAGGTTCTCATTTACGATACCGTCCGAAGCAGC 62468 Query 126463 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCA 126519 ||| || ||||| | | || || | | || || || |||| | || |||| Sbjct 62467 AAAGAAAGCCAGAACGTGGGAGATAAAATGACGCTCGTTGTCATTCATCCTGTTCGTCCA 62408 Query 126520 GTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||||| |||||||| ||||| || | ||| || |||||||| Sbjct 62407 GTCGTGCAGATCCTTAGAGAGGTCCATCTCTTCGGCAGTCCA 62366 >seq2640 Length=24278 Score = 134 bits (148), Expect = 2e-26 Identities = 349/523 (67%), Gaps = 13/523 (2%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | || || |||||| ||| ||||| || |||||| || || Sbjct 17606 GCAAAGTCGGTGTGCATGCCTTCATCACGGCTGATAAGTTCGTTGGAGAAGGTAAGACCG 17547 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| ||||| ||||| |||| |||||| || ||| || || || ||||||||||| Sbjct 17546 GGCATAAGACCACGCTTTTTCATCCAGAAGATAGCAGCGAAGGAGCCAGAGAAGAAGATA 17487 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCA 126223 ||||||||| ||||| |||| |||||||| ||||||| |||| |||| | | Sbjct 17486 CCCTCCACAGCGGCGAAGGCAACTAGACGCTCGGCAAAGG---TTGACTGCTTGTCGGAA 17430 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | |||||||| ||||| | ||||| || ||| || || | |||| || || || Sbjct 17429 ATCCACTTCAGTGCCCAATCGGCCTTACGCTTGATGCATGGAATAGTCTCGACAGCATCG 17370 Query 126284 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 126343 || ||| | || | || || ||||| |||| |||||| || ||||| Sbjct 17369 AACAGTCGGGTACGCTCGGCGGGGTCCCGAATGTATGTATCGATGAGTAGCGAGTATGTC 17310 Query 126344 TCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCG-CTTCGCTTA 126401 || ||||| | | ||| || | ||| | ||||||| | || | || |||| Sbjct 17309 TCTGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAACGAGCCTCCGCTGC 17251 Query 126402 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 126461 | || || || | || ||| | | || |||||| || || || || || ||| Sbjct 17250 T-TGAACTTCGTTGGAGAAACGCTCAACGAGGTTCTCATTTACGATACCGTCCGAAGCAG 17192 Query 126462 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 126518 | || || ||||||| | || || | |||| || || |||| | || ||| Sbjct 17191 CGAAGAAAGCCAGGACGTGAGAGATAAAGTGACGTTCGTTGTCATTCATCTTGTTCGTCC 17132 Query 126519 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||| || ||||| ||||| || | |||||| |||||||| Sbjct 17131 AGTCGTGCAGGTCCTTAGAGAGGTCCATCTCCTCAGCAGTCCA 17089 Score = 86.0 bits (94), Expect = 7e-12 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 125752 CTTGCCGTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGC-TGATAT 125810 |||| ||| ||| || |||||||||||||||||||||||||| | |||| ||| Sbjct 17951 CTTGGTGTAATCCGAGACGCGCTTCTCGAAGAAGTTTGTCTTCCC-TTGAAGCGAGATCA 17893 Query 125811 TCTCCATAAAATCAAATGGGTTCTTTGAGTTCCAA-ATTGTTGGCACCCCAATCTGTTTG 125869 | |||||||| || || ||||| ||||||| || ||| | | |||| | || Sbjct 17892 TGTCCATAAAGTCGAAGGGGTTGGTTGAGTTGTAATATTTGTCGTTGCCCAGAGAG-ATG 17834 Query 125870 AGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATG 125929 || ||||| || | |||| |||| ||||||| |||| || | |||||| ||||| Sbjct 17833 AGTAGACGGTCAGCGACGAACTCGATGTACTGGCACATGAGATCGGCGTTCATGCCGATA 17774 Query 125930 AGGTTACATGGGAGCGCGTC 125949 ||| || || | |||||| Sbjct 17773 AGGCTAACGGGCAACGCGTC 17754 >seq1739 Length=117728 Score = 100 bits (110), Expect = 3e-16 Identities = 408/633 (64%), Gaps = 20/633 (3%) Strand=Plus/Plus Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013 ||||||||||| || |||||||| || || | ||||| || || || || ||||| Sbjct 51223 GTGTATGGCTCGAAACACTCATTATTGCCAAGAATTTGACTCGTCGACGCAGTCGGCATA 51282 Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073 || || ||| || ||| | ||||| | | ||| | | ||||| ||| || Sbjct 51283 GGAGCGCAGAGCAGCGAGTTCCTAAGACCAGTGCGCGCAATCTTTGCTTTGAGCGCGGCC 51342 Query 114074 CAGTCGTAGTT-GAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTG--- 114129 ||||| | | || | || || | | ||| | || ||||| || ||||| Sbjct 51343 CAGTCCCACATCGACGTGGGTGTCACGCC-CCAGAGGTCGAACTGTAGCTGCCCTTGCTG 51401 Query 114130 GGAGG--CTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAG 114187 || || ||| | |||| | |||||||||||||| ||| |||||| | ||| Sbjct 51402 GGTGGGACTGCCCATCC-----AGGTCTCGTATGGGCCATCACGCTCCGCGAGCTCGCTA 51456 Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247 || || ||||| || |||| ||| || ||||| || || || || | ||||||| Sbjct 51457 CTAGCTTCGAGAGCAGCGTAATAAATCGTCTCGAAGATCTGAATGTTGAGCTGCTTGGCC 51516 Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 114307 | | || ||||| | | || || || | ||||||||||| || |||||| Sbjct 51517 TGGGGAGAGTCAAATGGCATACGCAGGGCCATGAAGGCGTCCGCGAGACCCTGCACACCG 51576 Query 114308 AGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT-CCACGGGATAAAAATT 114366 | || || ||||| || | | ||||| ||||| ||| | ||||||| | || Sbjct 51577 ACACCGATGGGGCGGTGACGGAAGTTAGAACGGCGAGC-CTCTGGCGTGGGATAATAGTT 51635 Query 114367 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 114426 ||||| | | || | || | | |||||||| || | ||| ||||||||| Sbjct 51636 GACGTCGATGATGCGGTTCAAGTTGTACGCCACAACCTTGGTCACCTCACGAAGCTTTT- 51694 Query 114427 GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 114486 | || ||||| || || | || ||| | || ||||| || || || || || Sbjct 51695 GGAAGTTGAACTGGCCGT-TC----TCGATGTACGTCGGCAGGGCAATCGAGGCTAGGTT 51749 Query 114487 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 114546 || |||| |||||||| || |||||| ||||| || || || | || ||| Sbjct 51750 GCAAACAGCAGTCTCATCGGGCGAAGAGTACTCGATAATCTCAGTGCAGAGGTTAGAAGA 51809 Query 114547 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTT 114579 ||| ||||| || | ||||||||| || ||||| Sbjct 51810 CTTGATGGTTCCAAGGTTCTTTTGGTTCGACTT 51842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597287002540520