Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2085 107 2e-18 seq1739 89.7 5e-13 >seq2085 Length=44481 Score = 107 bits (118), Expect = 2e-18 Identities = 167/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 95188 CGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC- 95246 || || |||||||| ||||||| ||| || | ||||| || || || |||| Sbjct 22579 CGTGTCCTCGCCGGTGAATTCCAAGTCGTCTGCCCCTGGCTCCTGCGTGAGCT--CGTCG 22522 Query 95247 -TCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCC-AACGGCTCCGTC 95304 ||||||| ||||| ||| | | |||||| | | | ||| | ||||||||||| Sbjct 22521 ATCTGGGTCTGTGGAACGACGACATGAAGAACAAGATCAT-CGCACATAACGGCTCCGTG 22463 Query 95305 CAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATC 95364 |||||||| | | || || | |||| |||||| ||||||||||||| ||||||||| Sbjct 22462 CAGAACATTGCCGAGATCCCTGCCGACACTAAGGCGATCTACAAGACCGTATGGGAGATC 22403 Query 95365 CCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 | ||| ||| ||||| | ||||||| ||| || || |||||||||||| Sbjct 22402 TCACAGAAGAAGATTCTCGATCTTGCGGCCGACCGTGGACCATTCATCTGCCAG 22349 >seq1739 Length=117728 Score = 89.7 bits (98), Expect = 5e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 95292 CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGAC 95351 ||| ||||| || |||||||| | | || || | |||| ||||||| |||||||||| Sbjct 51041 CAATGGCTCTGTGCAGAACATTGCCGAGATCCCCGCCGACACCAAGGCGATCTACAAGAC 50982 Query 95352 CGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCAT 95411 || ||||||||| ||||| || ||||| | ||||||| ||| || || ||||| Sbjct 50981 GGTATGGGAGATCTCGCAGAAGAAAATCCTCGATCTTGCGGCCGACCGTGGACCATTCAT 50922 Query 95412 CTGCCAG 95418 ||||||| Sbjct 50921 CTGCCAG 50915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494668044547240