Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1796 116 4e-21 seq1723 113 4e-20 >seq1796 Length=58898 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | || ||||| || || || ||||| || | Sbjct 51725 CCACCACGGAGACGAAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 51784 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || |||||| |||| | || ||||||||||| || Sbjct 51785 AAGGTACGCCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCGGGGGGA 51844 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 |||||||||||||| ||| || ||||| |||| || | |||||| | ||| || Sbjct 51845 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTG-TCAATGGTGTCGGACGACTCAAC 51903 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| ||||||||||| ||||| |||||||| Sbjct 51904 CTCAAGGGTGATAGTCTTGCCCGTCAGAGTTTTGACAAAGATCTGCAT 51951 >seq1723 Length=56463 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | |||||||| | || ||||| || || || || || || | Sbjct 44042 CCACCGCGGAGACGAAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAC 43983 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| ||||||||| | || | |||||||||||||| || Sbjct 43982 AAGGTACGCCCGTCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 43923 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| ||| || ||||| | || | |||||| | |||||| Sbjct 43922 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCGGACGACTCGACC 43863 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| |||||||| || || || |||||||| Sbjct 43862 TCAAGGGTAATAGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 43816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475447787604560