Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1796 104 2e-17 >seq1796 Length=58898 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | || || || || || || || ||||| ||||| || ||||| Sbjct 51494 ATGCCACCACGCAGACGCAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCC 51553 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || | ||| ||||| || | |||| ||||| || || || Sbjct 51554 GAAAGAGTGCGACCATCTTCGAGTTGCTTTCCGGCAAAGATCAGACGTTGTTGATCAGGG 51613 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || || || ||||| ||||| ||| || | || | || | ||||||||| || || Sbjct 51614 GGGATACCCTCCTTATCCTGAATCTTTGCCTTAA-CGTTATCGATGGTGTCGGATGATTC 51672 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||||| | ||| |||||||| || || || ||||| |||||||| Sbjct 51673 CACTTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 51723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451952807293240