Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2640 167 3e-36 seq1717 143 3e-29 seq1739 104 3e-17 >seq2640 Length=24278 Score = 167 bits (184), Expect = 3e-36 Identities = 380/560 (68%), Gaps = 15/560 (3%) Strand=Plus/Minus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| | || || |||||| ||| ||||| || |||||| ||||| Sbjct 17607 AGCAAAGTCGGTGTGCATGCCTTCATCACGGCTGATAAGTTCGTTGGAGAAGGTAAGACC 17548 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||| ||||| ||||| |||| |||||| || ||| || ||||||||||||||||| Sbjct 17547 GGGCATAAGACCACGCTTTTTCATCCAGAAGATAGCAGCGAAGGAGCCAGAGAAGAAGAT 17488 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGTATCA 127696 ||||||||| ||||| |||| ||||||||||||||||| |||| |||| | Sbjct 17487 ACCCTCCACAGCGGCGAAGGCAACTAGACGCTCGGCAAAGG---TTGACTGCTTGTCGGA 17431 Query 127697 AA-CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTC 127755 || |||||||| ||||| | ||||| || ||| ||||| | |||| || || || Sbjct 17430 AATCCACTTCAGTGCCCAATCGGCCTTACGCTTGATGCATGGAATAGTCTCGACAGCATC 17371 Query 127756 AAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 127815 || ||| | || | || || ||||| |||| |||||| || ||||| Sbjct 17370 GAACAGTCGGGTACGCTCGGCGGGGTCCCGAATGTATGTATCGATGAGTAGCGAGTATGT 17311 Query 127816 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCG-CTTCGCTT 127873 || ||||| | | ||| || | ||| | ||||||| | || | || |||| Sbjct 17310 CTCTGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAACGAGCCTCCGCTG 17252 Query 127874 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 127933 | || || || | || ||| | | || |||||| || || || || || || Sbjct 17251 CT-TGAACTTCGTTGGAGAAACGCTCAACGAGGTTCTCATTTACGATACCGTCCGAAGCA 17193 Query 127934 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTC 127990 || || || ||||||| | || || | |||| || || |||| | || || Sbjct 17192 GCGAAGAAAGCCAGGACGTGAGAGATAAAGTGACGTTCGTTGTCATTCATCTTGTTCGTC 17133 Query 127991 CAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA-ATTGCTCATTTGAGC 128049 ||||||| || ||||| ||||| || | |||||| |||||||| | | || | || Sbjct 17132 CAGTCGTGCAGGTCCTTAGAGAGGTCCATCTCCTCAGCAGTCCAGAAAGAAGCTTCG-GC 17074 Query 128050 CTTCTTATAGAGTTCCCAGA 128069 ||||||||| | || ||||| Sbjct 17073 CTTCTTATACATTTGCCAGA 17054 Score = 91.5 bits (100), Expect = 2e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 127225 CTTGCCGTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATT 127284 |||| ||| ||| ||| |||||||||||||||||||||||||| | || ||| | Sbjct 17951 CTTGGTGTAATCCGAGACGCGCTTCTCGAAGAAGTTTGTCTTCCCTTGAAGCGAGATCAT 17892 Query 127285 CTCCATAAAATCAAATGGGTTCTTTGAGTTCCAA-ATTGTTGGCACCCCAATCTGTTTGA 127343 |||||||| || || ||||| ||||||| || ||| | | |||| | ||| Sbjct 17891 GTCCATAAAGTCGAAGGGGTTGGTTGAGTTGTAATATTTGTCGTTGCCCAGAGAG-ATGA 17833 Query 127344 GGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGA 127403 | ||||| || | |||| |||| ||||||| |||| || | |||||| ||||| | Sbjct 17832 GTAGACGGTCAGCGACGAACTCGATGTACTGGCACATGAGATCGGCGTTCATGCCGATAA 17773 Query 127404 GGTTACATGGGAGCGCGTC 127422 || || || | |||||| Sbjct 17772 GGCTAACGGGCAACGCGTC 17754 >seq1717 Length=72410 Score = 143 bits (158), Expect = 3e-29 Identities = 348/521 (67%), Gaps = 7/521 (1%) Strand=Plus/Minus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| | ||||| |||||| |||||| || || ||||| ||||| Sbjct 62884 AGCAAAGTCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTAAGACC 62825 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 |||||||| || |||||||||| |||||| || ||| || || |||||||||||||| Sbjct 62824 AGGCATGAGGCCACGCTTCTTCATCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGAT 62765 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAA 127698 ||||||||| ||||| |||| |||||||||||||||| || |||| ||| Sbjct 62764 ACCCTCCACAGCGGCGAAGGCAACCAGACGCTCGGCAAAGG-TCGATTGCTTGTCGGAAA 62706 Query 127699 -CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757 |||||||| ||||| | ||||| | ||| ||||| | |||| || || || | Sbjct 62705 TCCACTTCAGTGCCCAATCCGCCTTACGTTTGATGCATGGAATAGTCTCGACAGCATCGA 62646 Query 127758 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 127817 | ||| | || | || || ||||| |||| |||||| || ||||| | Sbjct 62645 ACAGTCGGGTACGCTCGGCGGGGTCCCGAATGTATGTATCGATGAGTAGCGAGTATGTCT 62586 Query 127818 CGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 127876 | ||||| | | ||| || | ||| | ||||||| | || || || | | Sbjct 62585 CTGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAACGAGCCTCCGCTGCC 62527 Query 127877 TGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936 || || || | || ||| | || |||||| || || || || || ||||| Sbjct 62526 TGAACTTCGTTGGAGAAACGCTCTACGAGGTTCTCATTTACGATACCGTCCGAAGCAGCA 62467 Query 127937 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 127993 || || ||||| | | || || | | || || || |||| | || ||||| Sbjct 62466 AAGAAAGCCAGAACGTGGGAGATAAAATGACGCTCGTTGTCATTCATCCTGTTCGTCCAG 62407 Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||| |||||||| ||||| || | ||| || |||||||| Sbjct 62406 TCGTGCAGATCCTTAGAGAGGTCCATCTCTTCGGCAGTCCA 62366 >seq1739 Length=117728 Score = 104 bits (114), Expect = 3e-17 Identities = 411/634 (65%), Gaps = 22/634 (3%) Strand=Plus/Plus Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCT-GTGGAGGCTGTGGGCAT 115973 ||||||||||| || |||||||| || || |||| || | || || || || || ||||| Sbjct 51223 GTGTATGGCTCGAAACACTCATTATTGCC-AAGAATTTGACTCGTCGACGCAGTCGGCAT 51281 Query 115974 GGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTC 116033 || || ||| || ||| | ||||| | | ||| | | ||||| ||| | Sbjct 51282 AGGAGCGCAGAGCAGCGAGTTCCTAAGACCAGTGCGCGCAATCTTTGCTTTGAGCGCGGC 51341 Query 116034 CCAGTCGTAGTT-GAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTG-- 116090 |||||| | | || | || || | | |||| | || ||||| || ||||| Sbjct 51342 CCAGTCCCACATCGACGTGGGTGTCACGC-CCCAGAGGTCGAACTGTAGCTGCCCTTGCT 51400 Query 116091 -GGACG--CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGA 116147 || | ||| | |||| | ||||| |||||||| ||| |||||| | ||| Sbjct 51401 GGGTGGGACTGCCCATCC-----AGGTCTCGTATGGGCCATCACGCTCCGCGAGCTCGCT 51455 Query 116148 GCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGC 116207 || || ||||| || |||| ||| || ||||| || || || || | |||||| Sbjct 51456 ACTAGCTTCGAGAGCAGCGTAATAAATCGTCTCGAAGATCTGAATGTTGAGCTGCTTGGC 51515 Query 116208 CTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACC 116267 || | || ||||| | | ||| || || | ||||||||||| || ||||| Sbjct 51516 CTGGGGAGAGTCAAATGGCATACGCAGGGCCATGAAGGCGTCCGCGAGACCCTGCACACC 51575 Query 116268 GAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT-CCACGGGATAAAAAT 116326 || || || ||||| || | | ||||| ||||| ||| | ||||||| | | Sbjct 51576 GACACCGATGGGGCGGTGACGGAAGTTAGAACGGCGAGC-CTCTGGCGTGGGATAATAGT 51634 Query 116327 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 116386 | ||||| | | || | || | | |||||||| || | ||| ||||||||| Sbjct 51635 TGACGTCGATGATGCGGTTCAAGTTGTACGCCACAACCTTGGTCACCTCACGAAGCTTTT 51694 Query 116387 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 116446 | || ||||| || || | || ||| | || ||||| || || || || | Sbjct 51695 -GGAAGTTGAACTGGCCGT-TC----TCGATGTACGTCGGCAGGGCAATCGAGGCTAGGT 51748 Query 116447 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAAC 116506 | || |||| |||||||| || |||||| ||||| || || || | || ||| Sbjct 51749 TGCAAACAGCAGTCTCATCGGGCGAAGAGTACTCGATAATCTCAGTGCAGAGGTTAGAAG 51808 Query 116507 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTT 116540 ||| ||||| || | ||||||||| || ||||| Sbjct 51809 ACTTGATGGTTCCAAGGTTCTTTTGGTTCGACTT 51842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613438801616040