Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1723 163 7e-35 seq1796 154 3e-32 seq2729 120 7e-22 seq557 120 7e-22 seq3251 100 7e-16 seq2186 91.5 3e-13 seq2472 89.7 1e-12 >seq1723 Length=56463 Score = 163 bits (180), Expect = 7e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || || |||||||||||||| || | ||||||||| | || || | ||||| || ||| Sbjct 44477 AGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCATCCTCAAGC 44418 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 |||||||||||||| ||||| ||||||||||| ||| ||| || || ||||| ||| Sbjct 44417 TGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATC 44358 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || ||||||| |||| ||||||| || || || ||||||||||| ||||||||| Sbjct 44357 TTGGCCTTCACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTACCC 44298 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || ||||| Sbjct 44297 GTGAGGGTCTTGACGAATATTTG 44275 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| || || || ||||| |||| |||||| || | | ||| Sbjct 44264 CGCAGACGCAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAAAGAGTG 44205 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || ||||||||||||||||| ||||| || || || || || || Sbjct 44204 CGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGTTGATCAGGGGGGATACCC 44145 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || ||| ||| ||| |||| |||||| | || ||| || || | Sbjct 44144 TCCTTATCCTGGATTTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCACTTCGAGG 44085 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || ||||| || |||||||| ||||| Sbjct 44084 GTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTG 44047 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||||| || |||||||| |||| ||| ||||||| ||| || | || || Sbjct 44027 AGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGACAAGGTACGCCCGTCC 43968 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| ||||| |||||||||||||| || || ||| || || || Sbjct 43967 TCGAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCT 43908 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | |||||| | | || || || | || || ||| Sbjct 43907 TGGATCTTGGCCTTGACGTTATCAATGGTGTCGGACGACTCGACCTCAAGGGTAATAGTC 43848 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| ||||| || || || || || Sbjct 43847 TTGCCCGTCAGAGTCTTGACGAAGATCTG 43819 >seq1796 Length=58898 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || || |||||||| ||||| || | ||||||||| | || || | || || || ||| Sbjct 51290 AGATGAAGAGTCGATTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCGTCCTCAAGC 51349 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 |||||||||||||| ||||| ||||||||||| ||| ||| || || ||||| ||| Sbjct 51350 TGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATC 51409 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || ||| ||| |||| ||||||| || || || |||||||| || ||||||||| Sbjct 51410 TTGGCCTTGACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTACCC 51469 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| ||||| Sbjct 51470 GTGAGGGTTTTGACAAATATTTG 51492 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| ||||| || || |||||||| |||| |||||| || | | ||| Sbjct 51503 CGCAGACGCAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTG 51562 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || ||||||||||| ||||| ||||| || || || || || || Sbjct 51563 CGACCATCTTCGAGTTGCTTTCCGGCAAAGATCAGACGTTGTTGATCAGGGGGGATACCC 51622 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || |||||||||||| ||| ||| |||| |||||| | || ||| || || | Sbjct 51623 TCCTTATCCTGAATCTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCACTTCGAGA 51682 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || ||||| || |||||||| ||||| Sbjct 51683 GTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTG 51720 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||||| || |||||||| |||| ||||||||||| ||| || | || || Sbjct 51740 AGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGCCCGTCC 51799 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||||||||| ||||| || || ||| || || || Sbjct 51800 TCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCGGGGGGAATGCCCTCCTTGTCT 51859 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 51860 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGACGACTCAACCTCAAGGGTGATAGTC 51919 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| |||||||| ||||| || || Sbjct 51920 TTGCCCGTCAGAGTTTTGACAAAGATCTG 51948 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||| || | ||| || || |||||||| |||| |||||||||| | || Sbjct 51959 CGAAGACGCAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTGAGGGTG 52018 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 | ||||| || |||||||| ||||||||||| || || || ||||| ||| Sbjct 52019 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGTTGGTCAGGA 52069 >seq2729 Length=38494 Score = 120 bits (132), Expect = 7e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497 |||||| |||| |||||||||| | || | || || || ||||||||||| ||||| Sbjct 353 CTCCTTCTGGATATTGTAGTCAGAGAGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAA 294 Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557 |||||||||||| ||||| || ||| ||||| ||||| ||||| ||| || Sbjct 293 GATGAGACGCTGTTGGTCGGGGGGAATACCTTCCTTGTCCTGGATCTTCGCCTTGACATT 234 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 |||| ||||| | | || || |||| ||||||||||||||||||||||| || || Sbjct 233 ATCGATCGTGTCAGAGGACTCGACCTCCAGGGTGATCGTCTTACCCGTGAGAGTCTTGAC 174 Query 199618 AAAAATTTG 199626 || || || Sbjct 173 GAAGATCTG 165 Score = 104 bits (114), Expect = 6e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||| |||||||| |||| ||||| || | | ||| | || ||| Sbjct 145 AGGACAAGGTGAAGAGTGGACTCCTTCTGGATATTGTAATCCGAAAGAGTACGGCCGTCT 86 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 ||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct 85 TCCAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCGGGA 44 >seq557 Length=42797 Score = 120 bits (132), Expect = 7e-22 Identities = 157/214 (73%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||| |||||||| |||| |||||| || | | ||| | || ||| Sbjct 23916 AGGACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCGTCT 23975 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA-----AAAATTCCTTCTC 199532 || |||||||| ||||| ||||||||||| |||||||| ||| | ||| || Sbjct 23976 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGACGGGGGANNCGCCTCCTT 24035 Query 199533 GCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592 | || || ||| | ||||||| |||| ||||| | | || || || | ||||| Sbjct 24036 G-TCTTG-ATC-TGGCCTTCACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGCGTGA 24092 Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||| ||||||||||| || ||||| || || Sbjct 24093 TGGTCTTGCCCGTGAGAGTCTTGACAAAGATCTG 24126 Score = 89.7 bits (98), Expect = 1e-12 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497 |||||| |||| ||| || || | | || | || || || |||||||| |||||||| Sbjct 23708 CTCCTTCTGGATGTTATAATCGGAGAGTGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAA 23767 Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557 |||||||||||| ||||| || ||| || || || || ||||| ||| || Sbjct 23768 GATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCTTGGATCTTCGCCTTAACATT 23827 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 |||| ||||| | | || || |||| || || |||||||||||||| || || || Sbjct 23828 ATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTGAGGGTCTTGAC 23887 Query 199618 AAAAATTTG 199626 || || || Sbjct 23888 GAAGATCTG 23896 >seq3251 Length=9849 Score = 100 bits (110), Expect = 7e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| || || || |||||||||| ||||||||| | ||| Sbjct 7549 CGAAGACGGAGCACAAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGCTGAGAGTG 7490 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | ||||||||| |||||||| || |||||||| || ||||||||||| || Sbjct 7489 CGTCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGG 7440 >seq2186 Length=87839 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| || || || ||||| |||| ||||||||| | ||| Sbjct 62875 CGAAGACGGAGCACAAGGTGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTG 62934 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | |||||| || |||||||| || |||||||| || ||||||||||| || Sbjct 62935 CGTCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGG 62984 >seq2472 Length=20097 Score = 89.7 bits (98), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 107 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 166 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || |||||||| || |||||||| | |||||||| || ||| Sbjct 167 TCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGA 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178786879102573