Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1796 129 7e-25 seq2729 125 8e-24 seq557 122 1e-22 seq1723 118 1e-21 seq2472 95.1 1e-14 seq3251 89.7 6e-13 seq2186 86.0 7e-12 >seq1796 Length=58898 Score = 129 bits (142), Expect = 7e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || | || ||| |||| || ||||||||||| ||||| Sbjct 51760 CTCCTTCTGGATGTTGTAGTCAGACAAGGTACGCCCGTCCTCAAGCTGCTTGCCAGCGAA 51819 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || ||||| |||| || | || ||||||||| |||||| ||||| ||| Sbjct 51820 GATGAGACGTTGCTGATCGGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CGT 51878 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||| || || || | ||||| || ||||||||||| ||||| | Sbjct 51879 TGTCAATGGTGTCGGACGACTCAACCTCAAGGGTGATAGTCTTGCCCGTCAGAGTTTTGA 51938 Query 46581 CAAAGATTTGCAT 46593 ||||||| ||||| Sbjct 51939 CAAAGATCTGCAT 51951 Score = 123 bits (136), Expect = 3e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || |||||||| || || || || |||| || |||||||| |||||||| Sbjct 51305 TCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCGTCCTCAAGCTGCTTTCCGGCGAAA 51364 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||||||||| || | | |||||| ||| |||||| ||||| ||| Sbjct 51365 ATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTGGCCTTGA-CGTT 51423 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| || || || |||| ||| || || || ||||| || ||||| || Sbjct 51424 GTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTACCCGTGAGGGTTTTGAC 51483 Query 46582 AAAGATTTGCAT 46593 ||| |||||||| Sbjct 51484 AAATATTTGCAT 51495 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| | || ||||| ||||| ||||| || Sbjct 51532 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCATCTTCGAGTTGCTTTCCGGCAAA 51591 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| || || || || | || | | |||||| ||| ||||| ||| | | Sbjct 51592 GATCAGACGTTGTTGATCAGGGGGGATACCCTCCTTATCCTGAATCTTTGCCTTAACGTT 51651 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| |||||||| || | ||||| || ||||| || || || || || Sbjct 51652 ATCGATGGTGTCGGATGATTCCACTTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTCAC 51711 Query 46582 AAAGATTTGCAT 46593 |||||||||||| Sbjct 51712 AAAGATTTGCAT 51723 >seq2729 Length=38494 Score = 125 bits (138), Expect = 8e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 ||||||||||| |||||||||||||| || || ||||| |||| || |||||||| || Sbjct 358 GTACTCTCCTTCTGGATATTGTAGTCAGAGAGCGTGCGACCGTCCTCAAGCTGCTTTCCA 299 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| || | ||||| ||||||| || | | ||||||||| ||||||| |||| Sbjct 298 GCGAAGATGAGACGCTGTTGGTCGGGGGGAATACCTTCCTTGTCCTGGATCTTCGCCTTG 239 Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 | | | | |||||| || || || |||| ||||| || || ||||| || || Sbjct 238 ACATTATCGATCGTGTCAGAGGACTCGACCTCCAGGGTGATCGTCTTACCCGTGAGAGTC 179 Query 46577 TTAACAAAGATTTGCAT 46593 || || ||||| ||||| Sbjct 178 TTGACGAAGATCTGCAT 162 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||| || || ||||| || |||| || || |||||||||||||| Sbjct 125 CTCCTTCTGGATATTGTAATCCGAAAGAGTACGGCCGTCTTCCAGTTGCTTGCCGGCGAA 66 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCA-CGCTCTCCTTGTCCATGATCTTC 46510 || | ||||| ||||||| || | || |||||||| | |||||||| Sbjct 65 GATGAGACGCTGTTGGTCGGGAGGGATGGCCCTCCTTGT-CTTGATCTTC 17 >seq557 Length=42797 Score = 122 bits (134), Expect = 1e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| || || ||||| || ||||| |||| || |||||||||||| Sbjct 23703 GTGCTCTCCTTCTGGATGTTATAATCGGAGAGTGTGCGACCGTCCTCAAGCTGCTTGCCG 23762 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| || | ||||| ||||||| || | | ||||||||| ||||||| ||| Sbjct 23763 GCGAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCTTGGATCTTCGCCTTA 23822 Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 | | | | ||||||| || || || |||| || ||||| || ||||| || || Sbjct 23823 ACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTGAGGGTC 23882 Query 46577 TTAACAAAGATTTGCAT 46593 || || ||||| ||||| Sbjct 23883 TTGACGAAGATCTGCAT 23899 Score = 116 bits (128), Expect = 4e-21 Identities = 149/198 (75%), Gaps = 10/198 (5%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| |||| ||||||||||||||||| || Sbjct 23936 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCAAA 23995 Query 46462 TATCAAGCGCTGCTGGTC-GGCCGG----CACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 || | || |||||||| || ||| ||| |||||||| | ||||| | ||| Sbjct 23996 GATGAGACGTTGCTGGTCGGGACGGGGGANNCGC-CTCCTTGT-CTTGATC-TGGCCTTC 24052 Query 46517 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575 | ||| | | | ||||||| || || || || | ||||||||| |||||||| || || Sbjct 24053 A-CGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCCGTGAGAGT 24111 Query 46576 TTTAACAAAGATTTGCAT 46593 || |||||||| ||||| Sbjct 24112 CTTGACAAAGATCTGCAT 24129 Score = 95.1 bits (104), Expect = 1e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||| || || || ||||| |||| |||||||||||||| ||||| Sbjct 24166 CTCCTTCTGGATATTGTAATCCGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAA 24225 Query 46462 TATCAAGCGCTGCTGGTCGG 46481 |||||||||||||| |||| Sbjct 24226 GATCAAGCGCTGCTGATCGG 24245 >seq1723 Length=56463 Score = 118 bits (130), Expect = 1e-21 Identities = 153/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 46386 CCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGA 46445 ||||||| | || |||||| || || |||||||| || || || || | || || | Sbjct 44479 CCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCATCCTCAA 44420 Query 46446 GCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGA 46505 ||||||| |||||||| || | |||||||||||||| || | | |||||| ||| || Sbjct 44419 GCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGA 44360 Query 46506 TCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||| ||| | ||| | | | |||||| || || || |||| ||||||||| || Sbjct 44359 TCTTGGCCTTCA-CGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTA 44301 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || |||||||| Sbjct 44300 CCCGTGAGGGTCTTGACGAATATTTGCAT 44272 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || ||||| || | || ||| |||| ||||||||||| || ||||| Sbjct 44007 CTCCTTCTGGATGTTATAGTCAGACAAGGTACGCCCGTCCTCGAGCTGCTTTCCAGCGAA 43948 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| |||| || | || ||||||||| |||||| ||||| | Sbjct 43947 AATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 43888 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| || || || | || || || ||||||||||| || || || Sbjct 43887 ATCAATGGTGTCGGACGACTCGACCTCAAGGGTAATAGTCTTGCCCGTCAGAGTCTTGAC 43828 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 43827 GAAGATCTGCAT 43816 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||| || || |||||||| | || ||||| ||||| |||||||| Sbjct 44234 TCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAG 44175 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| || || || || | || | | |||||| ||| ||| || ||| | | Sbjct 44174 ATCAGACGTTGTTGATCAGGGGGGATACCCTCCTTATCCTGGATTTTTGCCTTAACGTTA 44115 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| |||||||| || | ||||| || ||||| || || || || ||| Sbjct 44114 TCGATGGTGTCGGATGATTCCACTTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACA 44055 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 44054 AAGATTTGCAT 44044 >seq2472 Length=20097 Score = 95.1 bits (104), Expect = 1e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| | || |||||||||||||| ||||| Sbjct 127 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 186 Query 46462 TATCAAGCGCTGCTGGTCGG 46481 |||||||||||||| |||| Sbjct 187 GATCAAGCGCTGCTGATCGG 206 >seq3251 Length=9849 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||||||| |||||||| | || |||||||||||||| ||||| Sbjct 7519 TCCTTTTGGATGTTGTAGTCGCTGAGAGTGCGTCCATCTTCGAGCTGCTTGCCAGCGAAG 7460 Query 46463 ATCAAGCGCTGCTGGTC 46479 |||| |||||||||||| Sbjct 7459 ATCAGGCGCTGCTGGTC 7443 >seq2186 Length=87839 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||| |||||||| | || |||||||||||||| ||||| Sbjct 62905 TCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCGAAG 62964 Query 46463 ATCAAGCGCTGCTGGTC 46479 |||| |||||||||||| Sbjct 62965 ATCAGGCGCTGCTGGTC 62981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565175382983880