Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1796 107 8e-18 seq1723 107 8e-18 >seq1796 Length=58898 Score = 107 bits (118), Expect = 8e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || || || || || || ||||| || || |||||||| Sbjct 51723 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACGATCACTCTCGAAGTGGAATCATCC 51664 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || |||| ||| ||||| |||||||| || || || ||||||||| Sbjct 51663 GACACCATCGATAACGTTAAGGCAAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAA 51604 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || || | || || ||||| |||||||| | ||| | ||||||| || Sbjct 51603 CAACGTCTGATCTTTGCCGGAAAGCAACTCGAAGATGGTCGCACTCTTTCGGATTACAAC 51544 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 51543 ATCCAGAAGGAGTCCACCCTTCAC 51520 >seq1723 Length=56463 Score = 107 bits (118), Expect = 8e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || || || || || || || || || || |||||||| Sbjct 44044 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACGATCACCCTCGAAGTGGAATCATCC 44103 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || |||| |||||| || |||||||| || || || ||||||||| Sbjct 44104 GACACCATCGATAACGTTAAGGCAAAAATCCAGGATAAGGAGGGTATCCCCCCTGATCAA 44163 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| | || || ||||| |||||||| | ||| | ||||||| || Sbjct 44164 CAACGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACTCTTTCGGATTACAAC 44223 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 44224 ATCCAGAAGGAATCCACCCTTCAC 44247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975492625397252