Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1717 131 2e-25 seq2640 122 1e-22 seq1643 91.5 2e-13 seq1739 87.8 2e-12 seq2085 82.4 9e-11 seq1745 82.4 9e-11 >seq1717 Length=72410 Score = 131 bits (144), Expect = 2e-25 Identities = 200/282 (71%), Gaps = 5/282 (2%) Strand=Plus/Minus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || ||||| || ||||||||| || ||| ||| ||||||||||| || | ||| Sbjct 62865 CCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTAAGACCAGGCATGAGGCCACGCTTC 62806 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || | ||| ||||||||| || ||||| |||||||| ||||||||| |||||| Sbjct 62805 TTCATCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATACCCTCCACAGCGGCGAAG 62746 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTCG---AACCACTTGAGAGCCCAGTT 119689 || | |||||||| || ||||||||| ||||||| | |||||| || ||||| | Sbjct 62745 GCAACCAGACGCTCGGC-AAAGGTCGATTGCTTGTCGGAAATCCACTTCAGTGCCCAATC 62687 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTCAGC 119749 |||||||| | ||||| || | ||| | || || ||||| ||| | | || || Sbjct 62686 CGCCTTACGTTTGATGCATGGAATAGTCTCGACAGCATCGAACAGTCGGGTACGCTCGGC 62627 Query 119750 ACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTC 119791 ||| ||| ||| |||| |||||| ||||| ||||| Sbjct 62626 GGGGTCCCGAATGTATGTATCGATGAGTAGCGAGTATGTCTC 62585 >seq2640 Length=24278 Score = 122 bits (134), Expect = 1e-22 Identities = 353/535 (66%), Gaps = 10/535 (2%) Strand=Plus/Minus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 |||||||| || ||| || || || |||| ||| || ||||| || || | || Sbjct 17588 CCTTCATCACGGCTGATAAGTTCGTTGGAGAAGGTAAGACCGGGCATAAGACCACGCTTT 17529 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || | ||| ||||| ||| || ||||| |||||||| ||||||||| |||||| Sbjct 17528 TTCATCCAGAAGATAGCAGCGAAGGAGCCAGAGAAGAAGATACCCTCCACAGCGGCGAAG 17469 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAGA-CTTGTCGAA---CCACTTGAGAGCCCAGTT 119689 || | ||||||||| ||||| ||| || ||||||| | |||||| || ||||| | Sbjct 17468 GCAACTAGACGCTCGGCAAA-GGTTGACTGCTTGTCGGAAATCCACTTCAGTGCCCAATC 17410 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTCAGC 119749 ||||||||||| ||||| || | ||| | || || ||||| ||| | | || || Sbjct 17409 GGCCTTACGCTTGATGCATGGAATAGTCTCGACAGCATCGAACAGTCGGGTACGCTCGGC 17350 Query 119750 ACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCAT-TTCAT 119808 ||| ||| ||| |||| |||||| ||||| ||||| || | | | ||| Sbjct 17349 GGGGTCCCGAATGTATGTATCGATGAGTAGCGAGTATGTCTCTGAGTGGATGTTCTCCAT 17290 Query 119809 TGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAGCAAAAT 119868 || ||| | | || || | ||||| || | ||| ||||||| | ||| Sbjct 17289 CATG-ATCTGGAAACCGTAGAAGCAACGAGCCTCCGCTGCTTGAACTTCGTTGGAGAAAC 17231 Query 119869 TGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAGATGTACT 119928 | || || ||| || || || || || |||||||||| || | || || Sbjct 17230 GCTCAACGAGGTTCTCATTTACGATACCGTCCGAAGCAGCGAAGAAAGCCAGGACGTGAG 17171 Query 119929 TTATGAATTTCTGTTCATTATCGTTGA--GTGTT-TTCCAGTCGTCCATATCTTTAGACA 119985 || || | |||| || || || | |||| ||||||||| || || ||||| | Sbjct 17170 AGATAAAGTGACGTTCGTTGTCATTCATCTTGTTCGTCCAGTCGTGCAGGTCCTTAGAGA 17111 Query 119986 AGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAGTTCCCA 120040 ||||| ||| ||||| |||||| ||| | ||||| ||||| | || ||| Sbjct 17110 GGTCCATCTCCTCAGCAGTCCAGAAAGAAGCTTCGGCCTTCTTATACATTTGCCA 17056 >seq1643 Length=53460 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/126 (77%), Gaps = 4/126 (3%) Strand=Plus/Plus Query 162989 CTGAAGAACCATACGAAGGTGCGACGGTTCTTGAAGCCCACAAAGGTGCATATTACACAC 163048 ||||||| | |||||||||||| || ||| | ||| || ||||||| || || | Sbjct 17680 CTGAAGAGCAATACGAAGGTGCTACCGTTATCGAACCCAGCAAAGGTTACTACGACGTCC 17739 Query 163049 CGATTACAGCCCTAGATTTCGAAGCAC--TGTATCCATCAATCATGATGGCACATAATCT 163106 ||||| | |||| |||||| ||| | ||||||| |||||||||||||| |||||||| Sbjct 17740 CGATTGCTACCCTCGATTTC--AGCTCTTTGTATCCGTCAATCATGATGGCGCATAATCT 17797 Query 163107 GTGCTA 163112 ||||| Sbjct 17798 ATGCTA 17803 >seq1739 Length=117728 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 110855 ACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTT 110914 ||||| |||||||||| |||||||| ||||||||||||||||| |||||| || Sbjct 52464 ACTTAGTGGCACGAATACAGTGGATATTAATACCAATACCACCCGCAGTCTTACTGATCA 52523 Query 110915 GTGCAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATT 110973 |||| ||||| |||| ||| | || || || || ||||| || | || || | Sbjct 52524 TAGCACAACTCT-TGAGAGTATCGTAGATGCCCTCGATCGAGTCGTCTTTCATGCACACG 52582 Query 110974 AGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCA 111033 || ||||| ||| | || || || || || || ||||| |||||||||| ||| Sbjct 52583 AGGAAGCACGAACTAAGTTGGGGGTTGGGGGTACCGGCGTTGAACAGTGTAGGTGAAGCA 52642 Query 111034 TGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGA 111073 || |||| | | |||||| |||||||| |||| Sbjct 52643 TGCGTGAAGTAGCGCTCGGACATTAGATTGTATGTCTCGA 52682 >seq2085 Length=44481 Score = 82.4 bits (90), Expect = 9e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920 |||||||||| |||||||| ||||||||||||||||| ||||||||| |||| Sbjct 23901 TGGCACGAATACAGTGGATATTAATACCAATACCACCCGCAGTCTTACTAATCATAGCAC 23960 Query 110921 -ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAG 110979 ||||| |||| ||| | || || || || || || || | || | | || ||| Sbjct 23961 AACTCT-TGAGGGTATCGTAGATGCCCTCGATTGAGTCGTCTTTCATACACACGAGGAAG 24019 Query 110980 CAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATG 111039 || ||| | ||| || || || || || ||||| | |||||||| ||||| || Sbjct 24020 CATGAACTGAGCTGGGGGTTTGGTGTACCGGCGTTGAATAATGTAGGTGAAGCATGCGTG 24079 Query 111040 AACAGACCTTGGGACATCTTGTTGTATGTGTCGA 111073 || | | |||||| ||||||||| |||| Sbjct 24080 AAGTAGCGCTCGGACATTAAGTTGTATGTCTCGA 24113 >seq1745 Length=100743 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/126 (75%), Gaps = 4/126 (3%) Strand=Plus/Plus Query 162989 CTGAAGAACCATACGAAGGTGCGACGGTTCTTGAAGCCCACAAAGGTGCATATTACACAC 163048 |||| || | |||||||||||| || ||| ||||| || ||||||| || || | Sbjct 24371 CTGATGAGCAATACGAAGGTGCCACCGTTATTGAACCCAGCAAAGGTTACTACGACGTCC 24430 Query 163049 CGATTACAGCCCTAGATTTCGAAGCAC--TGTATCCATCAATCATGATGGCACATAATCT 163106 | || | |||| |||||| ||| | |||||||||||||||||||||| || ||||| Sbjct 24431 CAATCGCTACCCTCGATTTC--AGCTCTTTGTATCCATCAATCATGATGGCGCACAATCT 24488 Query 163107 GTGCTA 163112 ||||| Sbjct 24489 ATGCTA 24494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588910336538200