Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq3528 114 2e-20 seq1669 96.9 5e-15 >seq3528 Length=1974 Score = 114 bits (126), Expect = 2e-20 Identities = 306/463 (66%), Gaps = 6/463 (1%) Strand=Plus/Minus Query 47861 CATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTT 47920 |||| |||||||| || | ||||| ||||| || || || | ||| ||||| || Sbjct 1618 CATGGCCCCAGTCGCGCTGGGCATCGAGATTACCGAGGTAAAGGCAGGACTGCTTCCCGA 1559 Query 47921 CAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTG 47980 || || || || | | ||||| || || || || || ||| || | | Sbjct 1558 GCGAAATATCTGCCGCGGCACGAGAGATCTTGCGCGTGACGAAGGTCCTACCGCGGCGGG 1499 Query 47981 GAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGT 48040 || |||||||| ||||| || ||| | || |||||||| ||||||| || || |||| Sbjct 1498 GACTCTCATGATTGAAAAGGATTCCATTGCATGCATACATGCCGTATGCCTCGCGGTAGT 1439 Query 48041 TCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAG 48100 || |||||| || | || | || || || || || || || ||||||| Sbjct 1438 TCACCGTGATCCAGAACGCGTACATCTTGGCGCATCCGTACGGGCTGCGAGGGTAGAAAG 1379 Query 48101 GTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTT 48160 | || ||||| |||| || ||||| ||||| || || || ||| |||||||||| Sbjct 1378 GCGTCGTCTCGCTCTGGGGTGTCTCGACGACCTTGCCGTACAGCTCAGACGTGGATGCTT 1319 Query 48161 GATAGATACGAACCCTATCTTCCA--TCTCAAGCAAACGGACTGCCTCAAGCACTCTCAG 48218 | |||| || || | ||| | | || | ||||| || || || | | || Sbjct 1318 GGTAGAATCGCACGTGCTTTTCGAGGCCGCAGG--TACGGATCGCGTCCAGGATGCGAAG 1261 Query 48219 GGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATG 48278 ||||| | |||||| | || || ||||||| |||||| || |||||||| ||||| Sbjct 1260 AGTGCCGAGGGCATCCACATCTCCGGTGTACTCGGCCATCTCGAAGGAAACCTTGACATG 1201 Query 48279 ACTCTGTGC-CCCAAGATTATAAATCTCATCTGGTTGAACCTG 48320 ||| || |||||| ||||| || || ||| || ||||| Sbjct 1200 GGACTGAGCGCCCAAG-TTATAGATTTCCGTTGGCTGCACCTG 1159 >seq1669 Length=86330 Score = 96.9 bits (106), Expect = 5e-15 Identities = 285/436 (65%), Gaps = 5/436 (1%) Strand=Plus/Plus Query 47861 CATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTT 47920 |||| |||||||| || | ||||| ||||| || || || | ||| ||||| || Sbjct 7362 CATGGCCCCAGTCGCGCTGGGCATCGAGATTACCGAGGTAAAGGCAGGACTGCTTCCCGA 7421 Query 47921 CAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTG 47980 || || || || | | ||||| || || || || || ||| || | | Sbjct 7422 GCGAAATATCTGCCGCGGCACGAGAGATCTTGCGCGTGACGAAGGTCCTACCGCGGCGGG 7481 Query 47981 GAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGT 48040 || |||||||| ||||| || ||| | || |||||||| ||||||| || || |||| Sbjct 7482 GACTCTCATGATTGAAAAGGATTCCATTGCATGCATACATGCCGTATGCCTCGCGGTAGT 7541 Query 48041 TCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAG 48100 || |||||| || | || | || || || || || || || ||||||| Sbjct 7542 TCACCGTGATCCAGAACGCGTACATCTTGGCGCATCCGTACGGGCTGCGAGGGTAGAAAG 7601 Query 48101 GTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTT 48160 | || ||||| |||| || || || ||||| || || || ||| |||||||||| Sbjct 7602 GCGTCGTCTCGCTCTGGGGTGTTTCGACGACCTTGCCGTACAGCTCAGACGTGGATGCTT 7661 Query 48161 GATAGATACGAACCCTATCTTC--CATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAG 48218 | |||| || || | ||| | | || | ||||| || || || | | || Sbjct 7662 GGTAGAATCGCACATGCTTTTCGAGACCGCAGG--TACGGATCGCGTCCAGGATACGAAG 7719 Query 48219 GGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATG 48278 |||||| | |||||| | || || || |||| |||||| || ||||| || ||||| Sbjct 7720 GGTGCCGAGGGCATCCACATCTCCGGTGTATTCGGCCATCTCGAAGGAAACTTTGACATG 7779 Query 48279 ACTCTGTGC-CCCAAG 48293 ||| || |||||| Sbjct 7780 GGACTGAGCGCCCAAG 7795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665420205693080