Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2640 109 7e-19 seq1717 104 3e-17 >seq2640 Length=24278 Score = 109 bits (120), Expect = 7e-19 Identities = 162/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 65005 ACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAA--AG 65061 ||| | ||||| || || ||||| | |||||| |||| ||| || | |||| || Sbjct 17383 ACTATTCCATGCATCAAGCGTAAGGCCGATTGGGCACTGAAGTGGATTTCCGACAAGCAG 17442 Query 65062 TCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCC 65121 || |||| |||||||| || |||| || || ||||||||||||||||||||| Sbjct 17443 TCAA---CCTTTGCCGAGCGTCTAGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCT 17499 Query 65122 GGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTC 65181 || || ||| ||||| | ||| |||| ||||| ||||| ||||| || || |||| Sbjct 17500 GGCTCCTTCGCTGCTATCTTCTGGATGAAAAAGCGTGGTCTTATGCCCGGTCTTACCTTC 17559 Query 65182 TCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 || || |||||||| ||| ||||| || | ||| || ||||| Sbjct 17560 TCCAACGAACTTATCAGCCGTGATGAAGGCATGCACACCGACTTTGC 17606 >seq1717 Length=72410 Score = 104 bits (114), Expect = 3e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 65026 AAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCGCCT 65084 |||||| | |||||| |||| ||| || | |||| ||| |||| |||||||| || Sbjct 62681 AAGGCGGATTGGGCACTGAAGTGGATTTCCGACAAGCAATCGA-CCTTTGCCGAGCGTCT 62739 Query 65085 TTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTG 65144 |||| || || ||||||||||||||||||||| || || ||| || || | || Sbjct 62740 GGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTG 62799 Query 65145 GTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGA 65204 | |||||||||| || |||||||| || || ||||| || || || || ||| || Sbjct 62800 GATGAAGAAGCGTGGCCTCATGCCTGGTCTTACTTTCTCCAACGAGCTCATCAGCCGTGA 62859 Query 65205 TGAGGGTCTCCACCAGGAGTTTGC 65228 |||||| | ||| || ||||| Sbjct 62860 TGAGGGCATGCACACCGACTTTGC 62883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596503089946720