Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1796 84.2 4e-11 >seq1796 Length=58898 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || |||||||| ||||| | | ||| || || ||||| || || || ||||| || || Sbjct 51350 TGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATC 51409 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | || || || || || ||||| || || | || ||||| ||||| Sbjct 51410 TTGGCCTTGACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTACCC 51469 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| |||||||||||||| Sbjct 51470 GTGAGGGTTTTGACAAATATTTGCAT 51495 Score = 84.2 bits (92), Expect = 4e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||| ||||||||||| || | | ||||||||||| || || || || || Sbjct 51568 ATCTTCGAGTTGCTTTCCGGCAAAGATCAGACGTTGTTGATCAGGGGGGATACCCTCCTT 51627 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || || || | || | || || || ||||| || || ||||| ||||| || Sbjct 51628 ATCCTGAATCTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCACTTCGAGAGTGAT 51687 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || ||||| |||||||| Sbjct 51688 CGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 51723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899554099780080