Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1977 113 1e-19 seq1603 98.7 3e-15 >seq1977 Length=76175 Score = 113 bits (124), Expect = 1e-19 Identities = 172/245 (70%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 251416 CACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTG 251475 ||| ||| ||| ||||| | || ||||||||| || || | |||| |||| | Sbjct 25150 CACATATCACAAACATGCAAGCGATAAGCATCACTGGCCTCGAACAGCCTCTCCTTCAAG 25091 Query 251476 AAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCA 251535 || | | ||| || ||||||||||||||||| ||||| || |||||||| |||||| Sbjct 25090 AACCCGGCAATACCATGCGAAATCATACAATCACGTTCCATCTCTCCGAAACGCAGACCA 25031 Query 251536 CCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAG 251595 ||||| ||| |||||||||| | ||||| || ||||| | || || || | Sbjct 25030 CCATCACGACTCCTACCCTCGACCGGCTGGCGCGTGAGGATCTGCACCGGTCCACGCGCA 24971 Query 251596 CGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATG 251655 || || ||| || | ||||| ||||| |||||||||||| ||| || |||| | Sbjct 24970 CGCGAGTGAATCTTGTCGTCCACCATGTGCTTCAGACGCTGGTAGTATGTAGGTCCGAGG 24911 Query 251656 AAGAT 251660 |||| Sbjct 24910 TAGAT 24906 >seq1603 Length=129623 Score = 98.7 bits (108), Expect = 3e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 251487 ACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGC 251546 ||| || ||||||||||||||||| ||||| || |||||||| ||||||||||| ||| Sbjct 108592 ACCATGCGAAATCATACAATCACGTTCCATCTCTCCGAAACGCAGACCACCATCACGACT 108651 Query 251547 CCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTG 251606 |||||| ||| | ||||| || ||||| | || || || | || || Sbjct 108652 CCTACCTTCGACCGGCTGGCGCGTGAGGATCTGCACTGGTCCACGCGCACGCGAGTGGAT 108711 Query 251607 CTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660 ||| || | ||||| ||||| |||||||||||| | | || |||| | |||| Sbjct 108712 CTTGTCGTCCACCATGTGCTTCAGACGCTGGTAGTACGTAGGTCCGAGGTAGAT 108765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471649408503703