Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq953 192 2e-44 >seq953 Length=1916 Score = 192 bits (212), Expect = 2e-44 Identities = 398/591 (67%), Gaps = 4/591 (1%) Strand=Plus/Minus Query 39101 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTTTCCGAT 39160 || |||||||||| || ||||||| | ||||| | || |||| | || ||| Sbjct 1114 TGTAGTGGTCAACTAATTTTGGCCACAGTTTTAGAATCTTGA---TATCTAACCTCAGAT 1058 Query 39161 TCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATATCCCACG 39220 || || || | ||| ||| | ||||| | || ||||| | | |||||||||| Sbjct 1057 TCATTCGGCGCTAAACCAGCATTATAATGATGTGGTCTAACATTATTGTAATATCCGTTT 998 Query 39221 ATATAGTCCGTTATGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCGGCATC 39280 ||||| || | | | || || || ||| || | || || || |||||| Sbjct 997 ATATAATCACTCACACTATATTTAGCGTCTCTAAAGTTTTCATATCCAACTTTTGGCATC 938 Query 39281 CATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCG 39340 ||||| |||| | || || || || ||||||||||| |||||||| ||||||||| Sbjct 937 CATTCCGTCTTAAAGCTTCTAAAAAATCGTTCCATTGGCGCATTATCCCAACAGTTTCCG 878 Query 39341 CGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCCGGAACTGCCTGCT 39400 |||| |||||||| ||| |||| | || ||||| || || | | | | | || Sbjct 877 CGCCTACTCATACTTTGTTTGATTTTATAGCGCCATAAACGTTGGC-GATATTTCAAACT 819 Query 39401 CGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCGGGCTTACCACGGGTTTC 39460 ||||||||||| || || || || ||||||| || || || || | | |||| Sbjct 818 TGTATAATGACTACCNTGGTCTGAATGAAACATCAGTCCTGACGGTTTTCCTCTGCTTTC 759 Query 39461 CCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGCTGTCCGGCGAGAACGACATGGCCCA 39520 | || | ||| |||||||| | || | | | || || || || ||||| ||||| Sbjct 758 ATACGCGAGTTCAAGCGCTTTTAATGTTAAATTAGTATCTGGTGACAATGACATCGCCCA 699 Query 39521 GCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGCTTACC 39580 || ||| ||| | ||| || | || | ||| ||||| | || ||||| || || || Sbjct 698 ACCAACTACTTTGCGTGCAAATAAATCAATAACGACGGCTAAATAGGCCCAACGATTGCC 639 Query 39581 CGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCACGGCGAACTG 39640 ||||| ||||| ||||||||||||||||| || || |||||| || | ||||| Sbjct 638 TGTCCAAATATACGTCACATCACCGCACCATACGGTATCTGGCTCAACAACATCAAACTG 579 Query 39641 CCTTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCACGTTTATA 39691 || || || ||| ||||| ||| ||| |||| |||||| | |||||| Sbjct 578 TCTATCGAGCAGGTTTGGGATTTCAAGATGCTCATTACCACCCCTTTTATA 528 Score = 138 bits (152), Expect = 3e-28 Identities = 112/136 (82%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 39975 ATTATCGAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTT 40034 |||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||| | Sbjct 238 ATTAACGAGAATTGTTCAGGGAGTCGGACATCAAGAGAGCGGTAGCCTTTTTTAATATAT 179 Query 40035 CATTCTCCATTTCAATGCGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTGTTCCG 40094 | || || | |||||||||||| | | || | |||||||| |||||||||||||| | Sbjct 178 CCTTTTCTAATTCAATGCGTTGGATTTGNTTTTTAAGCTCACGAATTTCAATTTGTTCGG 119 Query 40095 GGGTAATGGGGGAGGC 40110 | || || || || || Sbjct 118 GTGTCATTGGTGATGC 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132584356089086