Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1723 125 6e-24 seq1796 122 8e-23 seq557 113 4e-20 seq2729 86.0 6e-12 >seq1723 Length=56463 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || ||||| || || || || |||||||| ||| | || Sbjct 44044 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACGATCACCCTCGAAGTGGAATCATCC 44103 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| ||||| ||||| || || || || || || || ||||| Sbjct 44104 GACACCATCGATAACGTTAAGGCAAAA-ATCCAGGATAAGGAGGGTATCCCCCCTGATCA 44162 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| ||||||| ||||| || || || || ||| | | | || ||||| || Sbjct 44163 ACAACGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACTCTTTCGGATTACAA 44222 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || |||||||| || || ||| | || |||| |||| || || Sbjct 44223 CATCCAGAAGGAATCCACCCTTCACCTCGTTCTGCGTCTGCGTGGTGG 44270 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || |||||||| || || || || | || Sbjct 43816 ATGCAGATCTTCGTCAAGACTCTGACGGGCAAGACTATTACCCTTGAGGTCGAGTCGTCC 43875 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || || |||||||| Sbjct 43876 GACACCATTGATAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCCGATCAG 43935 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || || || || || ||||| ||||| | | | | |||| || |||||| Sbjct 43936 CAGCGTCTCATTTTCGCTGGAAAGCAGCTCGAGGACGGGCGTACCTTGTCTGACTATAAC 43995 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || || ||||| | || | ||||| || Sbjct 43996 ATCCAGAAGGAGTCCACCCTCCATTTGGTCCTTCGTCTCCGCGGTGG 44042 >seq1796 Length=58898 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || ||||| || || || || |||||||| ||| | || Sbjct 51723 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACGATCACTCTCGAAGTGGAATCATCC 51664 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| |||| ||| || || || || || || || || ||||| Sbjct 51663 GACACCATCGATAACGTTAAGGCAAA-GATTCAGGATAAGGAGGGTATCCCCCCTGATCA 51605 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| ||||||||||||| || || || || ||| | | | || ||||| || Sbjct 51604 ACAACGTCTGATCTTTGCCGGAAAGCAACTCGAAGATGGTCGCACTCTTTCGGATTACAA 51545 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || || ||| | || |||| |||| || ||| Sbjct 51544 CATCCAGAAGGAGTCCACCCTTCACCTCGTCCTGCGTCTGCGTGGTGGC 51496 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || || ||||| || || || || || | || Sbjct 51951 ATGCAGATCTTTGTCAAAACTCTGACGGGCAAGACTATCACCCTTGAGGTTGAGTCGTCC 51892 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || || |||||||| Sbjct 51891 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCCGATCAG 51832 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| || || || ||||| ||||| | | | | |||| || || ||| Sbjct 51831 CAACGTCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGGCGTACCTTGTCTGACTACAAC 51772 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || || ||||| Sbjct 51771 ATCCAGAAGGAGTCCACCCTCCATTTGGT 51743 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || ||||| ||||||||| | || || || | | Sbjct 51495 ATGCAAATATTTGTCAAAACCCTCACGGGTAAGACTATTACGTTGGAGGTCGAGTCATCA 51436 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || || || |||||||| || Sbjct 51435 GACACGATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCAG 51376 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | || || ||||| || ||||| ||||| | | |||| || || ||| Sbjct 51375 CAGCGCCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGTCGTACGCTGTCGGACTACAAC 51316 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| ||||||||||| || || Sbjct 51315 ATTCAGAAGGAATCGACTCTTCA 51293 >seq557 Length=42797 Score = 113 bits (124), Expect = 4e-20 Identities = 153/210 (73%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || ||||| || ||||| || || || || || || Sbjct 23899 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCC 23840 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || || ||||| ||| Sbjct 23839 GACACGATCGATAATGTTAAGGCGAAGATCCAAGACAAGGAGGGTATTCCCCCCGACCAA 23780 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 || ||| | ||||| ||||| || ||||| ||||| ||| | || | || ||||||| Sbjct 23779 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGTCG-CACAC-TCTCCGATTATA 23722 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGG 24911 |||| || ||||| || || ||||||| Sbjct 23721 ACATCCAGAAGGAGAGCACCCTTCACTTGG 23692 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/209 (70%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || |||||||| || || || || Sbjct 24129 ATGCAGATCTTTGTCAAGACTCTCACGGGCAAGACCATCACGCTCGAGGTCGAGTCCTCC 24070 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAG-GAATACC---TCCCG 24818 ||||| | || |||| || | |||| |||||||| || | | | || ||||| Sbjct 24069 GACACGATCGACAACGTGAAGGC--CAGAT-CAAGACAAGGAGGCGNNTCCCCCGTCCCG 24013 Query 24819 ATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATT 24878 | || |||||| | ||||||||||| || ||||| || || | | | || |||| Sbjct 24012 ACCAGCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTTTCGGATT 23953 Query 24879 ATAACATTCAAAAGGAATCGACACTACAC 24907 | ||||| || ||||| || || || ||| Sbjct 23952 ACAACATCCAGAAGGAGTCCACTCTTCAC 23924 >seq2729 Length=38494 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || ||||| || || || || || || || || | Sbjct 162 ATGCAGATCTTCGTCAAGACTCTCACGGGTAAGACGATCACCCTGGAGGTCGAGTCCTCT 221 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || ||||| ||| Sbjct 222 GACACGATCGATAATGTCAAGGCGAAGATCCAGGACAAGGAAGGTATTCCCCCCGACCAA 281 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || ||| | ||||| || || || ||||| ||||| Sbjct 282 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGA 316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449847442041320