Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1739 107 2e-18 seq27 104 2e-17 >seq1739 Length=117728 Score = 107 bits (118), Expect = 2e-18 Identities = 209/307 (68%), Gaps = 4/307 (1%) Strand=Plus/Minus Query 34318 TCAGTCTCCGGGTTGT--CACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAA 34375 || ||||| ||||| | ||| ||| || | |||||||||| |||||| |||| | Sbjct 114901 TCCGTCTCGGGGTTCTTGCACGACCCG--CAGAGCACAAACTTGTCGATGAAGGCATCGA 114844 Query 34376 GCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGT 34435 |||| || | | | | || ||| | ||| ||||| ||| | || |||||||| | Sbjct 114843 GCAGCTCACGAAGGCGAGAAGCGTTGTGTGCGCCATTGACAATGTACCGGTCGTTTTTTT 114784 Query 34436 AATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCG 34495 ||| | ||||| ||||| |||||||| |||||| |||| || || || ||| | Sbjct 114783 CATCAAAGGAGGTTTGAGCGCCTAGCTCGCAGCCGAAGAACTTGGTAGGATAGGTGGGAG 114724 Query 34496 GACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGC 34555 | || || || |||| || | ||||||| | ||| ||||||||||| || | Sbjct 114723 GGCGAGAGAGAGCGCGAGCGACATCAGACATGTTGGGTACGACGGTCTTGATGCCATTTC 114664 Query 34556 CCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCA 34615 |||| ||||||| ||||| | | | ||||| ||||||||| || ||| | | Sbjct 114663 CCTTGCCTTCGATCTTGGTCATCAGGAGGGGCATGCGGTAGCGGTAAAATTTGTCATCGA 114604 Query 34616 CATTGCG 34622 ||| ||| Sbjct 114603 CATCGCG 114597 >seq27 Length=65845 Score = 104 bits (114), Expect = 2e-17 Identities = 179/258 (69%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 34318 TCAGTCTCCGGGTTGT--CACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAA 34375 || ||||| ||||| | ||| |||| || | |||||||||| |||||| |||||| Sbjct 41042 TCCGTCTCGGGGTTCTTGCACGATCCG--CAAAGCACAAACTTGTCGATGAAGGCATCAA 40985 Query 34376 GCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGT 34435 |||| || | | | | || ||| | || ||||| ||| | || || ||||| | Sbjct 40984 GCAGCTCACGAAGGCGAGAAGCGTTGTGTGCACCATTGACAATGTACCGATCATTTTTCT 40925 Query 34436 AATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCG 34495 ||||| ||||| |||||||||||||| ||||| |||| || || || ||| | Sbjct 40924 CATCGAAGGAGGTTTGGGCGCCCAGCTCGCAGCCGAAAAACTTGGTGGGATAGGTGGGAG 40865 Query 34496 GACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGC 34555 | || || || |||| || | ||||||| | ||| ||||| |||||||| | Sbjct 40864 GGCGAGAGAGAGCGCGAGCGACATCAGACATGTTGGGTACGACGGTCTTAATGCCGTTCC 40805 Query 34556 CCTTTCCTTCGACCTTGG 34573 |||| || |||| ||||| Sbjct 40804 CCTTGCCCTCGATCTTGG 40787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412796723989067