Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq7117 109 5e-19 >seq7117 Length=600 Score = 109 bits (120), Expect = 5e-19 Identities = 318/478 (67%), Gaps = 30/478 (6%) Strand=Plus/Plus Query 26332 ATCAAACTCAACAACACCAAATCTTTCAGGATCATTTACGTGATACCCAAAGATATTAGC 26391 || ||| ||||| |||||||||| ||||||||| || || || || ||||| | | | || Sbjct 54 ATTAAATTCAACTACACCAAATCGTTCAGGATCTTTAACTTGGTAACCAAAAACAGTCGC 113 Query 26392 TCC---ACCATTCTTTTCAATATGTTCTTTAGCAGAAT-CTAAAATGCTACC---AAAAC 26444 || |||| | || || |||| | ||| | || ||| || ||| | Sbjct 114 ACCTTGACCACTTTTGGCA-----TTCTCCA-CAGCCTGCTTTAATT-TAGGTGTAAAGC 166 Query 26445 TCTGACCAAAGAATAAATTATCACCTAGCACAAGTGCTACAGA-ATCTTCACCA---ATA 26500 || ||| | || | |||||| || || || | ||| | ||| |||| | ||| Sbjct 167 CTTGTCCATAAAAAATATTATCTCCAAGTACTAA----ACACACATCGTCACTACCTATA 222 Query 26501 AAGTTCTCACCAATAATAAACGCTTCTGCTAAACCTTTTGGGCTATCCTGTATTGCATAC 26560 || ||||| || | |||||| |||| |||| || | ||||| ||| || ||| Sbjct 223 AAATTCTCGCCTAAAATAAAGGCTTGCGCTAGGCCGTCAGGGCTTGGCTGGGATGTATAA 282 Query 26561 TGTAGGGAAATACCAAAAGAAGAACCATCACC---TAGAAGATTTACAAAATTAATTTGA 26617 || ||||||||| || ||||| || || | | || | ||| | | | Sbjct 283 CTAAGTTTAATACCAAACTGTGATCCATCTCCCAATAAACGCTTAAATGAATCACT---A 339 Query 26618 TCTTCTGGTGTTGTAATTATTAGTATTTCCCTAATTCCAGAAAGCATTAGGACAGAGAGT 26677 |||||||| || || || || || | ||| | ||| |||| ||||||| || || | Sbjct 340 TCTTCTGGGGTAGTTATAATAAGCACTTCGCGAATGCCAGCTAGCATTAATACTGACAAC 399 Query 26678 GGATAATAAATCATAGGTTTATCGTAAATTGGTAATAGTTG-TTTACTAACCCCTTTAGT 26736 |||||||||||||| || ||||| ||||| || | || || ||| || ||| || || Sbjct 400 GGATAATAAATCATTGGCTTATCATAAATAGGCAGTAACTGCTTTGATACACCCATT-GT 458 Query 26737 AACTGGGTAAAGCCTTGTTCCACTACCACCTGCTAAGATAATACCTTTCATACTCCTC 26794 || |||||||| | || ||| || || || | |||||| ||||||||||| ||| Sbjct 459 AATAGGGTAAAGACGAGTGCCAGAGCCGCCCGCAAGGATAATTCCTTTCATACTACTC 516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475377395453280