Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1796 158 2e-33 seq1723 152 1e-31 >seq1796 Length=58898 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || |||||| || | ||| || || || || ||||| || || ||||| || Sbjct 51497 CCACCACGCAGACGCAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 51556 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | ||| ||||| ||||| ||||| |||||||| || | ||||||||| || || Sbjct 51557 AGAGTGCGACCATCTTCGAGTTGCTTTCCGGCAAAGATCAGACGTTGTTGATCAGGGGGG 51616 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || |||||||| ||||||||||| || || || || || || || | ||| ||| Sbjct 51617 ATACCCTCCTTATCCTGAATCTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCACT 51676 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||| ||||||||||| || | ||||| ||||| || ||||| Sbjct 51677 TCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 51723 >seq1723 Length=56463 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||||||||| | ||| || || ||||| ||||| || || ||||| | Sbjct 44272 TACCACCACGCAGACGCAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCG 44213 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||| ||||| ||||| ||||| || ||||| || | ||||||||| || | Sbjct 44212 AAAGAGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGTTGATCAGGGG 44153 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || |||||||| || || ||||| || || || || || || || | ||| | Sbjct 44152 GGATACCCTCCTTATCCTGGATTTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCA 44093 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || ||||||||||| || | ||||| ||||| || ||||| Sbjct 44092 CTTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 44044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981715002003541