Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1796 111 4e-19 seq1723 105 2e-17 seq2729 86.0 1e-11 >seq1796 Length=58898 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || ||||||||| | ||||||||| || ||||| |||| Sbjct 51708 AAGACCCTCACCGGCAAGACGATCACTCTCGAAGTGGAATCATCCGACACCATCGATAAC 51649 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||| || || || || || || || ||| | || ||||| Sbjct 51648 GTTAAGGCAAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAACAACGTCTGATCTTT 51589 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| | |||||||| | ||| | | ||||||||| ||||||| ||||| Sbjct 51588 GCCGGAAAGCAACTCGAAGATGGTCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCC 51529 Query 206365 ACTCTTCACCTTGT 206378 || |||||||| || Sbjct 51528 ACCCTTCACCTCGT 51515 >seq1723 Length=56463 Score = 105 bits (116), Expect = 2e-17 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGA-ATC 206243 || || ||||| || || |||||||| | ||||||||| || ||||| |||| | | Sbjct 44059 AAGACCCTCACCGGCAAGACGATCACCCTCGAAGTGGAATCATCCGACACCATCGATAAC 44118 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||| |||||| || || || || || || || || || ||| | || ||||| Sbjct 44119 GTTAAGGCAAAA-ATCCAGGATAAGGAGGGTATCCCCCCTGATCAACAACGTCTGATCTT 44177 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||||||||| | |||||||| | ||| | | ||||||||| ||||||| || || Sbjct 44178 CGCCGGAAAGCAACTCGAAGATGGTCGCACTCTTTCGGATTACAACATCCAGAAGGAATC 44237 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||||| ||| || | || || Sbjct 44238 CACCCTTCACCTCGTTCTGCGTCTGCG 44264 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || ||||| ||| || ||||| || || || ||||| ||||| || || || ||| Sbjct 44275 CAAATATTCGTCAAGACCCTCACGGGTAAGACCATCACGTTGGAGGTCGAGTCATCAGAC 44334 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| || ||| || Sbjct 44335 ACGATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCAGCAG 44394 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || ||||||||||||||| | || ||||| | || || | || |||||| | Sbjct 44395 CGCCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACGCTGTCGGACTACAACATT 44454 Query 206353 CAGAAAGAGTCTACTCTTCACCT 206375 ||||| ||||| |||||||| || Sbjct 44455 CAGAAGGAGTCGACTCTTCATCT 44477 >seq2729 Length=38494 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||||||||| ||||| ||||||| ||| || || | | ||| | || |||||| Sbjct 142 ACAAGGTGAAGAGTGGACTCCTTCTGGATATTGTAATCCGAAAGAGTACGGCCGTCTTCC 83 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 || ||||| ||||||||||| || || ||||| Sbjct 82 AGTTGCTTGCCGGCGAAGATGAGACGCTGTTG 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181685747797399