Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1723 109 5e-19 seq1796 100 3e-16 >seq1723 Length=56463 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | ||||| || ||||||| ||||||| ||| | | Sbjct 44044 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACGATCACCCTCGAAGTGGAATCATCC 44103 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || |||||| ||||| |||||||| || || ||||| Sbjct 44104 GACACCATCGATAACGTTAAGGCAAAAATCCAGGATAAGGAGGGTATCCCCCCTGATCAA 44163 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | || || | || ||| || ||||||||||||| | | | | | |||||||| Sbjct 44164 CAACGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACTCTTTCGGATTACAAC 44223 Query 25355 ATTCAAAAAGAATCCACCATTCA 25377 || || || ||||||||| |||| Sbjct 44224 ATCCAGAAGGAATCCACCCTTCA 44246 >seq1796 Length=58898 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | ||||| || ||||||| ||||||| ||| | | Sbjct 51723 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACGATCACTCTCGAAGTGGAATCATCC 51664 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || ||| ||| ||||| |||||||| || || ||||| Sbjct 51663 GACACCATCGATAACGTTAAGGCAAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAA 51604 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | || || | | ||| || ||||||||||||| | | | | | |||||||| Sbjct 51603 CAACGTCTGATCTTTGCCGGAAAGCAACTCGAAGATGGTCGCACTCTTTCGGATTACAAC 51544 Query 25355 ATTCAAAAAGAATCCACCATTCA 25377 || || || || |||||| |||| Sbjct 51543 ATCCAGAAGGAGTCCACCCTTCA 51521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445044777538080