Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2640 187 4e-41 seq1717 172 8e-37 >seq2640 Length=24278 Score = 187 bits (206), Expect = 4e-41 Identities = 377/546 (69%), Gaps = 19/546 (3%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| ||||||| || |||||||| || || || ||||| || |||||| | |||| Sbjct 17052 GATCTGGCAAATGTAT-AAGAAGGCCGAAGCTTCTTTCTGGACTGCTGAGGAGATGGACC 17110 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891 || ||| | | ||||| | | ||| ||| |||| || || || ||| Sbjct 17111 TCTCTAAGGACCTGCACGACTGGACGAACAAGATGAATGACAACGAACGTCACTTTATCT 17170 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 |||||||| || ||| ||||| || || || ||||| |||||||| | | Sbjct 17171 CTCACGTCCTGGC-TTTCTTCGCTGCTTCGGACGGTATCGTAAATGAGAACCTCGTTGAG 17229 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || || || || ||| | ||||| |||| || ||||| ||||||||| Sbjct 17230 CGTTTCTCCAACGAAGTTCAAGCAGCGGAGGCTCGTTGCTTCTACGGTTTCCAGATCATG 17289 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || || |||||||| || ||||| || ||| | |||||| Sbjct 17290 ATGGAGAACATCCACTCAGAGACATACTCGCTACTCATCGATACATACATTCGGGACCCC 17349 Query 1456072 GTCGAGAAGGACCACCTCT-TTCGC-GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGG 1456129 | |||| | ||| | || |||| || |||| || | || | | | | |||| Sbjct 17350 GCCGAGC-GTACC-CGACTGTTCGATGCTGTCGAGACTATTCCATGCATCAAGCGTAAGG 17407 Query 1456130 CCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186 |||| ||||| |||||||||| | ||||| || || || |||||||||||| || Sbjct 17408 CCGATTGGGCACTGAAGTGGATTTCCGACAAGCAG----TCAAC-CTTTGCCGAGCGTCT 17462 Query 1456187 CGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTG 1456245 || | ||| ||||| || ||||| ||||| ||||| ||| ||| || ||||| || Sbjct 17463 AGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCTGGCTCCTTCGCTGCTATCTTCTG 17522 Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCG 1456305 | | || ||||| || || |||||||||||| ||| ||||||| ||||||| || | Sbjct 17523 GATGAAAAAGCGTGGTCTTATGCCCGGTCTT-ACCTTCTCCAACGAACTTATCAGCCGTG 17581 Query 1456306 ACGAAG 1456311 | |||| Sbjct 17582 ATGAAG 17587 >seq1717 Length=72410 Score = 172 bits (190), Expect = 8e-37 Identities = 374/545 (69%), Gaps = 21/545 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| ||||||||||| || || || ||||| ||||| ||| | |||| Sbjct 62329 GATCTGGCAAATGTAC-AAAAAGGCCGAAGCTTCTTTCTGGACTGCCGAAGAGATGGACC 62387 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891 || || | | ||||| | | ||| ||| ||||||| ||||| ||| Sbjct 62388 TCTCTAAGGATCTGCACGACTGGACGAACAGGATGAATGACAACGAGCGTCATTTTATCT 62447 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| || || || ||| || || || || ||||| |||||||| | | Sbjct 62448 CCCACGTTCTGGCTTTCTTT-GCTGCTTCGGACGGTATCGTAAATGAGAACCTCGTAGAG 62506 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || || || || || | ||||| |||| || ||||| ||||||||| Sbjct 62507 CGTTTCTCCAACGAAGTTCAGGCAGCGGAGGCTCGTTGCTTCTACGGTTTCCAGATCATG 62566 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || || |||||||| || ||||| || ||| | |||||| Sbjct 62567 ATGGAGAACATCCACTCAGAGACATACTCGCTACTCATCGATACATACATTCGGGACCCC 62626 Query 1456072 GTCGAGAAGGACCACCTCT-TTCGC-GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGG 1456129 | |||| | ||| | || |||| || |||| || | || | | | |||| Sbjct 62627 GCCGAGC-GTACC-CGACTGTTCGATGCTGTCGAGACTATTCCATGCATCAAACGTAAGG 62684 Query 1456130 CCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186 | || ||||| |||||||||| | ||||| | ||||| |||||||||||| || Sbjct 62685 CGGATTGGGCACTGAAGTGGATTTCCGACAAGCAA----TCGAC-CTTTGCCGAGCGTCT 62739 Query 1456187 CGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTG 1456245 || | ||| ||||| || ||||| ||||| ||||| || ||| |||||||| || Sbjct 62740 GGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTG 62799 Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCTT-CTGCTTTAGCAACGAATTTATCAGTCGC 1456304 | | |||||||| ||||||||||| |||||| || || |||||| | ||||| || Sbjct 62800 GATGAAGAAGCGTGGCCTCATGCCTGGTCTTACT--TTCTCCAACGAGCTCATCAGCCGT 62857 Query 1456305 GACGA 1456309 || || Sbjct 62858 GATGA 62862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176950946056878