Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1796 114 1e-20 seq1723 111 1e-19 seq2729 105 6e-18 seq557 93.3 4e-14 >seq1796 Length=58898 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||||||||| || | || || || |||| || |||||||| || || || Sbjct 51305 TCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCGTCCTCAAGCTGCTTTCCGGCGAAA 51364 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | ||||| | |||||| ||| |||||| ||| | ||| Sbjct 51365 ATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTGGCCTTGA-CGTT 51423 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||| || || ||||||| ||| || || |||||||| | ||||| || Sbjct 51424 GTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTACCCGTGAGGGTTTTGAC 51483 Query 35725 AAATATCTGCAT 35736 |||||| ||||| Sbjct 51484 AAATATTTGCAT 51495 >seq1723 Length=56463 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | || || || | || || |||||||| || || || Sbjct 44463 CTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCATCCTCAAGCTGCTTTCCGGCGAA 44404 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| | |||||| ||| |||||| ||||| || Sbjct 44403 AATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTGGCCTTCA-CGT 44345 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||||| |||||| || |||||||| | || || | Sbjct 44344 TGTCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTACCCGTGAGGGTCTTGA 44285 Query 35724 CAAATATCTGCAT 35736 | ||||| ||||| Sbjct 44284 CGAATATTTGCAT 44272 >seq2729 Length=38494 Score = 105 bits (116), Expect = 6e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 35529 CCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCA 35588 |||| || | ||||||||||| || || ||||| || | | || || |||| || | Sbjct 369 CCAAGTGAAGGGTACTCTCCTTCTGGATATTGTAGTCAGAGAGCGTGCGACCGTCCTCAA 310 Query 35589 GCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGA 35648 ||||||| || || || || | ||||| ||||| | |||| | ||||||||| || Sbjct 309 GCTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCGGGGGGAATACCTTCCTTGTCCTGGA 250 Query 35649 TCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTAC 35708 |||| ||| | | | | | |||||| || || ||||||| |||||||| |||| Sbjct 249 TCTTCGCCTTGACATTATCGATCGTGTCAGAGGACTCGACCTCCAGGGTGATCGTCTTAC 190 Query 35709 CCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| | ||| || || || |||||||| Sbjct 189 CCGTGAGAGTCTTGACGAAGATCTGCAT 162 >seq557 Length=42797 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/198 (73%), Gaps = 10/198 (5%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | || || |||| || |||||||| || ||||| Sbjct 23936 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCAAA 23995 Query 35605 TATCAACCGCTGCTGGTC----CGAAGGA-ACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || | || |||||||| || ||| ||| |||||||| | ||||| | |||| Sbjct 23996 GATGAGACGTTGCTGGTCGGGACGGGGGANNCGC-CTCCTTGT-CTTGATC-TGGCCTTC 24052 Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | |||| | | ||||||| || || ||||| | |||||| || || ||||| | ||| Sbjct 24053 A-CGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCCGTGAGAGT 24111 Query 35719 TTTCACAAATATCTGCAT 35736 || ||||| |||||||| Sbjct 24112 CTTGACAAAGATCTGCAT 24129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450743342148520