Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1723 118 1e-21 seq1796 113 5e-20 seq2472 89.7 5e-13 seq557 89.7 5e-13 seq1867 84.2 2e-11 seq3251 82.4 8e-11 seq2186 82.4 8e-11 >seq1723 Length=56463 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTG 134569 || || ||||| ||||| || ||||| ||||| | ||| ||| | ||| |||||||| Sbjct 44018 TGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGACAA-GGTACGCCCGTCCTCGAGCTG 43960 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || ||||| | ||||||||||||||| || ||||| || || ||||| || || Sbjct 43959 CTTTCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCTTGGATCTT 43900 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| || | ||||||||||| || || || || ||||| || || || || Sbjct 43899 GGCCTTGACGTTATCAATGGTGTCGGACGACTCGACCTCAAGGGTAATAGTCTTGCCCGT 43840 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||| || ||||| || ||||| Sbjct 43839 CAGAGTCTTGACGAAGATCTGCAT 43816 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| |||||||| || ||||||||||| || |||||||| || || ||| || Sbjct 44261 AGACGCAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGA 44202 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || ||||| || || || || || |||| ||| || ||||| || || || || || Sbjct 44201 CCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGTTGATCAGGGGGGATACCCTCC 44142 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || |||||| || || || | |||||||| |||||||| ||||| || Sbjct 44141 TTATCCTGGATTTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCACTTCGAGGGTG 44082 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || || || |||||||| Sbjct 44081 ATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 44044 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGAGTCGTCGAG 134566 || || || || || ||||| ||||||||||||| || || | || || || || || Sbjct 44477 AGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGC-GTACGACCATCCTCAAG 44419 Query 134567 CTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAAT 134626 ||| || || || ||||| | |||||||| ||||| || || || || || || || || Sbjct 44418 CTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGAT 44359 Query 134627 TTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACC 134686 || || || ||| | ||||| || || || || || | || ||||| ||||| Sbjct 44358 CTTGGCCTTCACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTACC 44299 Query 134687 GGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || ||||| |||||||| Sbjct 44298 CGTGAGGGTCTTGACGAATATTTGCAT 44272 >seq1796 Length=58898 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTG 134569 || || ||||| ||||| || ||||||||||| | ||| ||| | ||| || ||||| Sbjct 51749 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAA-GGTACGCCCGTCCTCAAGCTG 51807 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || || | ||| ||||||||||| || ||||| || || ||||| || || Sbjct 51808 CTTGCCAGCGAAGATGAGACGTTGCTGATCGGGGGGAATGCCCTCCTTGTCTTGGATCTT 51867 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | ||||||||||| || || || || || || || || || || Sbjct 51868 GGCCTTGACGTTGTCAATGGTGTCGGACGACTCAACCTCAAGGGTGATAGTCTTGCCCGT 51927 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | |||||| || || || ||||| Sbjct 51928 CAGAGTTTTGACAAAGATCTGCAT 51951 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGAGTCGTCGAG 134566 || || || || |||||||| ||||||||||||| || || | || || ||| || || Sbjct 51290 AGATGAAGAGTCGATTCCTTCTGAATGTTGTAGTCCGACAGC-GTACGACCGTCCTCAAG 51348 Query 134567 CTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAAT 134626 ||| || || || ||||| | |||||||| ||||| || || || || || || || || Sbjct 51349 CTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGAT 51408 Query 134627 TTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACC 134686 || ||||| ||| | ||||| || || || || || | ||||| || ||||| Sbjct 51409 CTTGGCCTTGACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTACC 51468 Query 134687 GGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||| || || |||||||| Sbjct 51469 CGTGAGGGTTTTGACAAATATTTGCAT 51495 >seq2472 Length=20097 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| || |||||||||||| Sbjct 92 CCACCACGGAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 151 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| || || ||||| |||||||||||||| || Sbjct 152 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGAGGG 211 Query 134607 ATGC 134610 |||| Sbjct 212 ATGC 215 >seq557 Length=42797 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || ||||| ||||| || || ||||| || Sbjct 24131 CCGCCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCCGAG 24190 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || ||| |||||||| ||||| || || ||||| |||||||||||||| || Sbjct 24191 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGATCGGGAGGG 24250 Query 134607 ATGC 134610 |||| Sbjct 24251 ATGC 24254 >seq1867 Length=52122 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || |||||||| |||||||||||||||| || ||| || || || Sbjct 28154 ACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGCTAAGGGTACGACCATCTTCA 28095 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTAT 134608 || || ||||| ||||| ||||| || ||||| ||||| || || Sbjct 28094 AGTTGCTTGCCAGCAAAGATCAATCGTTGCTGGTCGGGAGGGAT 28051 >seq3251 Length=9849 Score = 82.4 bits (90), Expect = 8e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || ||||||||||| ||||||||||||| | ||| | Sbjct 7546 AGACGGAGCACAAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGCTGAGAGTGCGT 7487 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 || |||||||| ||||| || || |||| |||||||| || || || |||| Sbjct 7486 CCATCTTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATGC 7432 >seq2186 Length=87839 Score = 82.4 bits (90), Expect = 8e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| ||||| |||||||| || ||||||||||||| | ||| | Sbjct 62878 AGACGGAGCACAAGGTGAAGCGTAGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGT 62937 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 || |||||||| ||||| || || |||| |||||||| || || || |||| Sbjct 62938 CCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGC 62992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505342054395880