Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2640 109 8e-19 >seq2640 Length=24278 Score = 109 bits (120), Expect = 8e-19 Identities = 169/241 (70%), Gaps = 3/241 (1%) Strand=Plus/Minus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 ||||| || ||||| || | ||| ||||| | || || | |||||| || || || Sbjct 17612 AAGCAAGCAAAGTCGGTGTGCATGCCTTCATCACGGCTGATAAGTTCGTTGGAGAAGGTA 17553 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 || || ||||| |||||||||||||| | ||| || || ||||| || || ||||| ||| Sbjct 17552 AGACCGGGCATAAGACCACGCTTTTTCATCCAGAAGATAGCAGCGAAGGAGCCAGAGAAG 17493 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT-- 39791 ||||| || || || || || || ||||| || | ||| | | ||| | || | Sbjct 17492 AAGATACCCTCCACAGCGGCGAAGGCAACTAGACGCTCGGCAAAGGTTGACTGCTTGTCG 17433 Query 39792 -GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 39850 ||||||||| |||||||||| || || ||| | || || || || || | |||| Sbjct 17432 GAAATCCACTTCAGTGCCCAATCGGCCTTACGCTTGATGCATGGAATAGTCTCGACAGCA 17373 Query 39851 T 39851 | Sbjct 17372 T 17372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686832218255160