Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1796 118 9e-22 seq1723 114 1e-20 >seq1796 Length=58898 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || || || || || |||||||| || | | ||| |||| || Sbjct 51743 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGCCCGTCCTCA 51802 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | |||||||| || ||||| || || | ||||| || || | Sbjct 51803 AGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCGGGGGGAATGCCCTCCTTGTCTTGG 51862 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | | || | ||||| | | ||||| || || || |||| ||| Sbjct 51863 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGACGACTCAACCTCAAGGGTGATAGTCTTG 51922 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||||||||||||| |||||||| |||||| Sbjct 51923 CCCGTCAGAGTTTTGACAAAGATCTGCATA 51952 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || |||| |||| || | || | || || || || || || ||||| || Sbjct 51495 TGCCACCACGCAGACGCAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCG 51554 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | |||| | |||||||| || || ||||| | || ||||| |||||||| || | Sbjct 51555 AAAGAGTGCGACCATCTTCGAGTTGCTTTCCGGCAAAGATCAGACGTTGTTGATCAGGGG 51614 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||| ||||| ||||| || | | | || | ||||| | | ||| | Sbjct 51615 GGATACCCTCCTTATCCTGAATCTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCA 51674 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| ||||| || | ||||| || || || |||||||||||||||||| Sbjct 51675 CTTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCATA 51724 >seq1723 Length=56463 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | |||||||| | || || || || || || || ||||| | Sbjct 44042 CCACCGCGGAGACGAAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAC 43983 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | ||| |||| |||||||| || || ||| ||||||||||||| ||||| || || Sbjct 43982 AAGGTACGCCCGTCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 43923 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| || | | | || | ||||| | | || || Sbjct 43922 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCGGACGACTCGACC 43863 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || |||| |||||||||||||| || || ||||| |||||| Sbjct 43862 TCAAGGGTAATAGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCATA 43815 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 27085 TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACAC 27144 |||| | |||||||| || || |||||| | || ||||| |||||||| || || | || Sbjct 44206 TGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGTTGATCAGGGGGGATAC 44147 Query 27145 CCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTA 27204 |||| ||||| ||| || || | | | || | ||||| | | ||| ||||| | Sbjct 44146 CCTCCTTATCCTGGATTTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCACTTCGA 44087 Query 27205 GAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || | ||||| || || || |||||||||||||||||| Sbjct 44086 GGGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCATA 44043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424888209497928