Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2640 104 3e-17 seq1717 100 4e-16 >seq2640 Length=24278 Score = 104 bits (114), Expect = 3e-17 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | || ||||| ||| |||||||| || |||||| ||||| Sbjct 17606 GCAAAGTCGGTGTGCATGCCTTCATCACGGCTGATAAGTTCGTTGGAGAAGGTAAGACCG 17547 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||| ||||| ||||| |||| ||| | ||||| ||| || || |||||||||||| Sbjct 17546 GGCATAAGACCACGCTTTTTCATCCAGAAGATAGCAGCGAAGGAGCCAGAGAAGAAGATA 17487 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 ||||||||| || || |||| || || ||||| |||| Sbjct 17486 CCCTCCACAGCGGCGAAGGCAACTAGACGCTCGGCAAAGG 17447 >seq1717 Length=72410 Score = 100 bits (110), Expect = 4e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | |||||||| ||| || || || || ||||| ||||| Sbjct 62883 GCAAAGTCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTAAGACCA 62824 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 |||||||| || |||||||||| ||| | || || ||| || || |||||||||||| Sbjct 62823 GGCATGAGGCCACGCTTCTTCATCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATA 62764 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGA-GACTTTGCATCAAA 122837 ||||||||| || || |||| || || ||||| |||| ||| ||| | || Sbjct 62763 CCCTCCACAGCGGCGAAGGCAACCAGACGCTCGGCAAAGG-TCGATTGCTTGTCGGAAAT 62705 Query 122838 CCATTTCATTGCCCATTTCGCCTT 122861 ||| |||| |||||| | |||||| Sbjct 62704 CCACTTCAGTGCCCAATCCGCCTT 62681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627961982282400