Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2640 143 3e-29 seq1717 132 6e-26 seq1739 100 4e-16 seq1587 84.2 3e-11 >seq2640 Length=24278 Score = 143 bits (158), Expect = 3e-29 Identities = 374/559 (67%), Gaps = 15/559 (3%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | || || |||||| ||| ||||| || |||||| ||||| Sbjct 17606 GCAAAGTCGGTGTGCATGCCTTCATCACGGCTGATAAGTTCGTTGGAGAAGGTAAGACCG 17547 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| ||||| ||||| |||| |||||| || ||| || ||||||||||||||||| Sbjct 17546 GGCATAAGACCACGCTTTTTCATCCAGAAGATAGCAGCGAAGGAGCCAGAGAAGAAGATA 17487 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGTATCAA 130193 ||||||||| ||||| |||| |||||||| ||||||| |||| |||| || Sbjct 17486 CCCTCCACAGCGGCGAAGGCAACTAGACGCTCGGCAAAGG---TTGACTGCTTGTCGGAA 17430 Query 130194 A-CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | |||||||| ||||| | ||||| || ||| || || | |||| || || || Sbjct 17429 ATCCACTTCAGTGCCCAATCGGCCTTACGCTTGATGCATGGAATAGTCTCGACAGCATCG 17370 Query 130253 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 130312 || ||| | || | || || ||||| |||| |||||| || ||||| Sbjct 17369 AACAGTCGGGTACGCTCGGCGGGGTCCCGAATGTATGTATCGATGAGTAGCGAGTATGTC 17310 Query 130313 TCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCG-CTTCGCTTA 130370 || |||| | | ||| || | ||| | ||||||| | || | || |||| Sbjct 17309 TCTGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAACGAGCCTCCGCTGC 17251 Query 130371 TCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 130430 | || || || | | ||| | | || |||||| || || || || || ||| Sbjct 17250 T-TGAACTTCGTTGGAGAAACGCTCAACGAGGTTCTCATTTACGATACCGTCCGAAGCAG 17192 Query 130431 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 130487 | || || ||||||| | || || | |||| || || |||| | || ||| Sbjct 17191 CGAAGAAAGCCAGGACGTGAGAGATAAAGTGACGTTCGTTGTCATTCATCTTGTTCGTCC 17132 Query 130488 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA-ATTGCTCATTTGAGCC 130546 |||||| || ||||| ||||| || | |||||| |||||||| | | || | ||| Sbjct 17131 AGTCGTGCAGGTCCTTAGAGAGGTCCATCTCCTCAGCAGTCCAGAAAGAAGCTTCG-GCC 17073 Query 130547 TTCTTATAGAGTTCCCAGA 130565 |||||||| | || ||||| Sbjct 17072 TTCTTATACATTTGCCAGA 17054 Score = 84.2 bits (92), Expect = 3e-11 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGC-TGATATTCTCCATAAAATCAAA 129795 || |||||||||||||||||||||||||| | |||| ||| | |||||||| || || Sbjct 17935 ACGCGCTTCTCGAAGAAGTTTGTCTTCCC-TTGAAGCGAGATCATGTCCATAAAGTCGAA 17877 Query 129796 TGGGTTCTTTGAGTTCCAA-ATTGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGA 129854 ||||| ||||||| || ||| | | ||| | |||| ||||| || | || Sbjct 17876 GGGGTTGGTTGAGTTGTAATATTTGTCGTTGCCCAGAGAG-ATGAGTAGACGGTCAGCGA 17818 Query 129855 CGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCG 129914 || |||| ||||||| |||| |||| |||||| ||||| ||| || || | || Sbjct 17817 CGAACTCGATGTACTGGCACATGAGATCGGCGTTCATGCCGATAAGGCTAACGGGCAACG 17758 Query 129915 CGTC 129918 |||| Sbjct 17757 CGTC 17754 >seq1717 Length=72410 Score = 132 bits (146), Expect = 6e-26 Identities = 347/521 (67%), Gaps = 9/521 (2%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||||| |||||| |||||| || || ||||| ||||| Sbjct 62883 GCAAAGTCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTAAGACCA 62824 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 |||||||| || |||||||||| |||||| || ||| || || |||||||||||||| Sbjct 62823 GGCATGAGGCCACGCTTCTTCATCCAGAAGATGGCAGCGAAGGAACCAGAGAAGAAGATA 62764 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA- 130194 ||||||||| ||||| |||| |||||||| ||||||| || |||| ||| Sbjct 62763 CCCTCCACAGCGGCGAAGGCAACCAGACGCTCGGCAAAGG-TCGATTGCTTGTCGGAAAT 62705 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254 |||||||| ||||| | |||||| | ||| || || | |||| || || || || Sbjct 62704 CCACTTCAGTGCCCAATCCGCCTTACGTTTGATGCATGGAATAGTCTCGACAGCATCGAA 62645 Query 130255 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 130314 ||| | || | || || ||||| |||| |||||| || ||||| || Sbjct 62644 CAGTCGGGTACGCTCGGCGGGGTCCCGAATGTATGTATCGATGAGTAGCGAGTATGTCTC 62585 Query 130315 GCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 130373 |||| | | ||| || | ||| | ||||||| | || || || | || Sbjct 62584 TGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAACGAGCCTCCGCTGCCT 62526 Query 130374 GTACCTCATCTGCAAAATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCA 130432 | || || | || | || | | | || |||||| || || || || || ||||| Sbjct 62525 GAACTTCGT-TGGAGAAACGCTCTACGAGGTTCTCATTTACGATACCGTCCGAAGCAGCA 62467 Query 130433 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 130489 || || ||||| | | || || | | || || || |||| | || ||||| Sbjct 62466 AAGAAAGCCAGAACGTGGGAGATAAAATGACGCTCGTTGTCATTCATCCTGTTCGTCCAG 62407 Query 130490 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||| |||||||| ||||| || | ||| || |||||||| Sbjct 62406 TCGTGCAGATCCTTAGAGAGGTCCATCTCTTCGGCAGTCCA 62366 >seq1739 Length=117728 Score = 100 bits (110), Expect = 4e-16 Identities = 410/634 (65%), Gaps = 22/634 (3%) Strand=Plus/Plus Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCT-GTGGAGGCTGTGGGCAT 118252 ||||||||||| || |||||||| || || |||| || | || || || || || ||||| Sbjct 51223 GTGTATGGCTCGAAACACTCATTATTGCC-AAGAATTTGACTCGTCGACGCAGTCGGCAT 51281 Query 118253 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTC 118312 || || ||| || ||| | ||||| | | ||| | | ||||| ||| | Sbjct 51282 AGGAGCGCAGAGCAGCGAGTTCCTAAGACCAGTGCGCGCAATCTTTGCTTTGAGCGCGGC 51341 Query 118313 CCAGTCGTAGTT-GAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTG-- 118369 |||||| | | || | || || | | ||| | || ||||| || ||||| Sbjct 51342 CCAGTCCCACATCGACGTGGGTGTCACGCC-CCAGAGGTCGAACTGTAGCTGCCCTTGCT 51400 Query 118370 -GGACG--CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGA 118426 || | ||| | |||| | ||||| |||||||| ||| |||||| | ||| Sbjct 51401 GGGTGGGACTGCCCATCC-----AGGTCTCGTATGGGCCATCACGCTCCGCGAGCTCGCT 51455 Query 118427 GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGC 118486 || || ||||| || |||| ||| || || || || || || || | |||||| Sbjct 51456 ACTAGCTTCGAGAGCAGCGTAATAAATCGTCTCGAAGATCTGAATGTTGAGCTGCTTGGC 51515 Query 118487 CTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACC 118546 || | || ||||| | | || || || | ||||||||||| || ||||| Sbjct 51516 CTGGGGAGAGTCAAATGGCATACGCAGGGCCATGAAGGCGTCCGCGAGACCCTGCACACC 51575 Query 118547 GAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT-CCACGGGATAAAAAT 118605 || || || ||||| || | | ||||| ||||| ||| | ||||||| | | Sbjct 51576 GACACCGATGGGGCGGTGACGGAAGTTAGAACGGCGAGC-CTCTGGCGTGGGATAATAGT 51634 Query 118606 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 118665 | ||||| | | || | || | | |||||||| || | ||| ||||||||| Sbjct 51635 TGACGTCGATGATGCGGTTCAAGTTGTACGCCACAACCTTGGTCACCTCACGAAGCTTTT 51694 Query 118666 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 118725 | || ||||| || || | || ||| | || ||||| || || || || | Sbjct 51695 -GGAAGTTGAACTGGCCGT-TC----TCGATGTACGTCGGCAGGGCAATCGAGGCTAGGT 51748 Query 118726 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAAC 118785 | || |||| |||||||| || |||||| ||||| || ||||| | ||| ||| Sbjct 51749 TGCAAACAGCAGTCTCATCGGGCGAAGAGTACTCGATAATCTCAGTGCAGAGGTTAGAAG 51808 Query 118786 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTT 118819 ||| ||||| || | ||||||||| || ||||| Sbjct 51809 ACTTGATGGTTCCAAGGTTCTTTTGGTTCGACTT 51842 >seq1587 Length=67671 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 180864 AGAATAGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTT 180923 ||| |||||||| | | |||||||||||| || || || ||||| | | |||||| Sbjct 12002 AGAGTAGATGTTGGCGAGCTTGGCACCGTAACCGTTACGGCCACCGGTTAGTTTCTTCTC 12061 Query 180924 GTTGTCATCGTAGTTTGTACTCGTGAGGAGGTGACCAAAGGTAAGTTCTGGATTCCAAAT 180983 |||||| |||||||| | | | ||||| ||||||||| | |||||||| |||| || Sbjct 12062 GTTGTCGTCGTAGTTGGAAGAAGACAGGAGATGACCAAAGATGAGTTCTGGGATCCACAT 12121 Query 180984 ATCCTC 180989 | ||| Sbjct 12122 CTTCTC 12127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618366252205640