Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1717 127 2e-24 seq2640 118 1e-21 >seq1717 Length=72410 Score = 127 bits (140), Expect = 2e-24 Identities = 166/224 (74%), Gaps = 8/224 (4%) Strand=Plus/Plus Query 94736 TTCCGTGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGTGG-TTTGATACAA--AGTCG 94791 |||| || || |||| | ||| |||||||||| |||||||| ||| |||| | ||| Sbjct 62664 TTCCATGCAT-CAAACGTAAGGCGGATTGGGCACTGAAGTGGATTTCCGACAAGCAATCG 62722 Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851 ||||||| ||||| || | || || || ||| ||||||||||||||||||||| Sbjct 62723 A---CCTTTGCCGAGCGTCTGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCTGGT 62779 Query 94852 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 |||||| || || | ||| | |||||||| || |||||||| ||||| |||||| Sbjct 62780 TCCTTCGCTGCCATCTTCTGGATGAAGAAGCGTGGCCTCATGCCTGGTCTTACTTTCTCC 62839 Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||| ||| ||||| ||||| | ||| || ||||| Sbjct 62840 AACGAGCTCATCAGCCGTGATGAGGGCATGCACACCGACTTTGC 62883 >seq2640 Length=24278 Score = 118 bits (130), Expect = 1e-21 Identities = 370/561 (66%), Gaps = 19/561 (3%) Strand=Plus/Plus Query 94406 TCTGGGAACTCTATAAGAAGGCTCAAATGAGTAATTGGACTGCTGAAGAGGTAGATCTCT 94465 ||||| || | ||||||||||| || | ||||||||||| ||| | || |||| Sbjct 17054 TCTGGCAAATGTATAAGAAGGCCGAAGCTTCTTTCTGGACTGCTGAGGAGATGGACCTCT 17113 Query 94466 CAAAGGATTTGGACGATTGGAAGACTCTAAATGAAAATGAAAA-GAAATTCATAAAAT-- 94522 | ||||| || |||| |||| || | | ||||| ||| || ||| ||| || Sbjct 17114 CTAAGGACCTGCACGACTGGACGAA-CAAGATGAA--TGACAACGAACGTCACTTTATCT 17170 Query 94523 ---ACATCCTGGCATTCTTTGCTGGATCCGATGGAATTGTTTTTGAGAATATCAATAACA 94579 || ||||||| ||||| |||| || || || || || |||||| || | | Sbjct 17171 CTCACGTCCTGGCTTTCTTCGCTGCTTCGGACGGTATCGTAAATGAGAACCTCGTTGAGC 17230 Query 94580 ACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCCTTCTATGCGTATCAGTGTCATA 94639 || | | || || ||| | | || || | | |||||| | | ||| |||| Sbjct 17231 GTTTCTCCAACGAAGTTCAAGCAGCGGAGGCTCGTTGCTTCTACGGTTTCCAGA-TCATG 17289 Query 94640 ATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGT 94698 ||| | | | || ||||||||| |||||| || | || ||| ||| Sbjct 17290 ATGGAGAACATCCACTCAGAGACATACTCGCTACTCATCGATACATACATTCGGGACCCC 17349 Query 94699 GCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAG-C 94757 || ||| | | || || || || || | || |||| || || ||| | ||| | Sbjct 17350 GCCGAGCGTACCCGACTGTTCGATGCTGTCGAGACTATTCCATGCAT-CAAGCGTAAGGC 17408 Query 94758 GGATTGGGCTATGAAGTGG-TTTGATACAA--AGTCGCGTTCCTTTGCTGAGCGACTCTT 94814 |||||||| |||||||| ||| |||| |||| ||||||| ||||| || | Sbjct 17409 CGATTGGGCACTGAAGTGGATTTCCGACAAGCAGTCAA---CCTTTGCCGAGCGTCTAGT 17465 Query 94815 CGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCT 94874 || || || ||| |||||||||||||||||||| |||||| ||||| | ||| | Sbjct 17466 TGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCTGGCTCCTTCGCTGCTATCTTCTGGAT 17525 Query 94875 CAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGA 94934 || ||||| ||||| ||||| ||||| |||||||||||| |||||| ||||| || Sbjct 17526 GAAAAAGCGTGGTCTTATGCCCGGTCTTACCTTCTCCAACGAACTTATCAGCCGTGATGA 17585 Query 94935 GGGACTCCACCAAGAGTTTGC 94955 || | ||| || ||||| Sbjct 17586 AGGCATGCACACCGACTTTGC 17606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583195773711560