Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1739 140 4e-28 seq2085 131 2e-25 seq2640 129 6e-25 seq1717 122 1e-22 >seq1739 Length=117728 Score = 140 bits (154), Expect = 4e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 79692 CTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCA-GC 79750 |||||| || |||||||||||||||||||||||||| ||||| || |||||||| | Sbjct 52534 CTTGAGAGTATCGTAGATGCCCTCGATCGAGTCGTCTTTCATGCACACGAGGAAGCACGA 52593 Query 79751 TCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGA 79810 | | | || |||||| |||||||||||||| || || || | || ||||||||| Sbjct 52594 ACTAAGT-TGGGGGTTGGGGGTACCGGCGTTGAACAGTGTAGGTGAAGCATGCGTGAAGT 52652 Query 79811 ACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGC 79870 | | | ||| |||| ||| ||||| |||||||| || || ||||| ||||||| Sbjct 52653 AGCGCTCGGACATTAGATTGTATGTCTCGATGACGCGCTCGATATCCTCGCCATGGATGC 52712 Query 79871 CGACCGCGACGCGCATGAAGAGGTACTGGGG 79901 |||| | ||| ||||||| | || |||||| Sbjct 52713 CGACAGAGACACGCATGATCATGTGCTGGGG 52743 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| ||| | ||||||||||||||||| || || ||| ||| Sbjct 52743 CCCCAGCACATGATCATGCGTGTCTCTGTCGGCATCCATGGCGAGGATATCGAGCGCGTC 52684 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 |||||||||| | || ||| | || | ||||||||| || | || || || ||| Sbjct 52683 ATCGAGACATACAATCTAATGTCCGAGCGCTACTTCACGCATGCTTCACCTACACTGTTC 52624 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGC-TGTTTCCTAGTGGCTATGAAGGATGA 19281 ||||||||||| |||||| || | | | | || ||||| ||| ||||| || || Sbjct 52623 AACGCCGGTACCCCCAACCCCCA-ACTTAGTTCGTGCTTCCTCGTGTGCATGAAAGACGA 52565 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAG 19312 | || |||||||||||||| || |||||| Sbjct 52564 CTCGATCGAGGGCATCTACGATACTCTCAAG 52534 Score = 93.3 bits (102), Expect = 5e-14 Identities = 200/295 (68%), Gaps = 8/295 (3%) Strand=Plus/Plus Query 78864 CATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCT 78923 ||||||| | || || || ||||| || |||| | |||| || ||||| || | ||| Sbjct 51546 CATGAAGGCGTCCGCGAGACCCTGCACACCGACACCGATGGGGCGGTGACGGAAGTTAGA 51605 Query 78924 CTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGT 78983 || ||| | || || ||| |||| ||||||| |||||||| ||| || Sbjct 51606 ACGGCGAGCCTCTGGCGTGGGATAATAGTTGACGTCGATGATGCGGTTCAAGTTGTACGC 51665 Query 78984 GACGACCCGAGTCACCTC--GTACAATTTGGCGAAATCAAAATGAT--TTCCTTTGATGA 79039 || ||| |||||||| | | ||||| || | || || ||| | |||| Sbjct 51666 CACAACCTTGGTCACCTCACGAAGCTTTTGG--AAGTTGAACTGGCCGTTC--TCGATGT 51721 Query 79040 AAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCT 79099 | ||||| ||| | ||| || |||||||| || || ||||| || || ||| || Sbjct 51722 ACGTCGGCAGGGCAATCGAGGCTAGGTTGCAAACAGCAGTCTCATCGGGCGAAGAGTACT 51781 Query 79100 CGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTT 79154 |||| || || ||||| | ||||| ||||||||||| || | |||||| ||||| Sbjct 51782 CGATAATCTCAGTGCAGAGGTTAGAAGACTTGATGGTTCCAAGGTTCTTTTGGTT 51836 >seq2085 Length=44481 Score = 131 bits (144), Expect = 2e-25 Identities = 416/631 (66%), Gaps = 22/631 (3%) Strand=Plus/Minus Query 19841 GCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATC 19900 |||||||| || || || ||| | || | |||||||| || ||||| || ||||| ||| Sbjct 23279 GCCAAGTCCAACCAAAAAAACCTTGGAACCATCAAGTCTTCTAACCTCTGCACTGAGATC 23220 Query 19901 ATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGCCTGCCG 19960 || ||| || ||| ||||||||||| || || || ||||| || | ||||||| Sbjct 23219 ATCGAGTACTCTTCGCCCGACGAGACTGCTGTCTGCAACCTGGCCTCGATTGCCCTGCCG 23160 Query 19961 ACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTAC--GAGGTGACCCGGGTCG 20018 || | | || || | ||| |||| ||||| | | ||||||||| ||| | Sbjct 23159 ACGTACATCGAGAACGGTCAGTTCAACTT--CCAAAAGCTTCGTGAGGTGACCAAGGTTG 23102 Query 20019 TCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAGGCGGCGCGCA 20078 | || ||| |||| ||| ||||||| |||| || || || || ||| ||| Sbjct 23101 TGGCGTATAACTTGAACCGCATCATCGACGTCAACTACTATCCCACGCCGGAGGCTCGCC 23042 Query 20079 AGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCA 20138 || || | |||||||| || |||| |||| || ||||| || || |||| ||||| Sbjct 23041 GTTCTAACTTCCGCCACCGCCCCATCGGTGTCGGTGTACAGGGTCTTGCGGACGCTTTCA 22982 Query 20139 TGATGCTCGGCCTCT--CATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTT 20196 || || | || | | |||||||| || |||| ||||||||| ||||| Sbjct 22981 TG--GCCCTGCGTATGCCATTCGACTCCCCTGAGGCCAAACAGCTCAACATTCAGATCTT 22924 Query 20197 CGAGGCCGTGTACCACGCGGCCCTCCTGGA-ATCGT-GCGAACTCGCCAAAGAGGACGGC 20254 ||| | | || |||| | ||| || | | || |||| ||||| | || ||| Sbjct 22923 CGAAACAATTTATTACGC--CGCTCTTGAAGCTAGTAGCGAGCTCGCGGAGCGTGATGGC 22866 Query 20255 CCGTACGAGACGTTCAAGGGGTCGCCCGCG-TCCGAGGGTATCCTCCAGCCGGACATGTG 20313 |||||||||| | | ||| |||||| | |||| | || ||| ||| | || Sbjct 22865 ACGTACGAGACCTGGATGGGCAGTCCCGCGCAGCAAGGGCA-GCTACAGTTCGACCTCTG 22807 Query 20314 GGGCGTCAC-----TGAGAATG-AGTTTTGGAGCGCCCTCAAGGTTGAGATCAAGACCCA 20367 |||||| || | |||| | ||| ||| ||||||| |||| | | || Sbjct 22806 GGGCGTGACACCCACGTCAATGTGGGACTGGGCCGCGCTCAAGGCGAAGATTGCG-CGCA 22748 Query 20368 C-GGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCA 20426 | || || | |||||| | ||| ||| || |||||||| || ||||| ||||| Sbjct 22747 CTGGTCTAAGGAACTCGCTACTCTGCGCTCCTATGCCGACTGCGTCGACGAGTCAGATTC 22688 Query 20427 TGGGGAACAACGAGGCTTTCGAGCCGTACAC 20457 | || ||||| || ||||||||| ||||| Sbjct 22687 TTGGCAACAATGAATGTTTCGAGCCCTACAC 22657 Score = 125 bits (138), Expect = 8e-24 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 79692 CTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCT 79751 |||||| || ||||||||||||||||| |||||||| |||||| || |||||||| | Sbjct 23965 CTTGAGGGTATCGTAGATGCCCTCGATTGAGTCGTCTTTCATACACACGAGGAAGCA--T 24022 Query 79752 CGAC--ATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809 || | ||| ||||| |||||||||||||| | || || | || ||||||||| Sbjct 24023 GAACTGAGCTGGGGGTTTGGTGTACCGGCGTTGAATAATGTAGGTGAAGCATGCGTGAAG 24082 Query 79810 AACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATG 79869 | | | ||| | | ||| ||||| |||||||| || || ||||| |||||| Sbjct 24083 TAGCGCTCGGACATTAAGTTGTATGTCTCGATGACGCGCTCGATATCCTCGCCATGGATG 24142 Query 79870 CCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901 ||||| | ||| ||||||| | || |||||| Sbjct 24143 CCGACAGAGACACGCATGATCATGTGCTGGGG 24174 Score = 116 bits (128), Expect = 4e-21 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| ||| | ||||||||||||||||| || || ||| ||| Sbjct 24174 CCCCAGCACATGATCATGCGTGTCTCTGTCGGCATCCATGGCGAGGATATCGAGCGCGTC 24115 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 |||||||||| || | ||| | || | ||||||||| || | || || | ||| Sbjct 24114 ATCGAGACATACAACTTAATGTCCGAGCGCTACTTCACGCATGCTTCACCTACATTATTC 24055 Query 19223 AACGCCGGTACGAACAACCCGCAGAT--GTCGAGCTGTTTCCTAGTGGCTATGAAGGATG 19280 ||||||||||| ||||| ||| | || | || ||||| ||| |||||| || | Sbjct 24054 AACGCCGGTACACCAAACCCCCAGCTCAGTTCA--TGCTTCCTCGTGTGTATGAAAGACG 23997 Query 19281 ACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312 || || |||||||||||||| || |||||| Sbjct 23996 ACTCAATCGAGGGCATCTACGATACCCTCAAG 23965 Score = 114 bits (126), Expect = 1e-20 Identities = 215/312 (69%), Gaps = 8/312 (3%) Strand=Plus/Plus Query 78864 CATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCT 78923 |||||| | || || || ||||| || |||| | |||| || |||||||| | ||| Sbjct 22980 CATGAAAGCGTCCGCAAGACCCTGTACACCGACACCGATGGGGCGGTGGCGGAAGTTAGA 23039 Query 78924 CTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGT 78983 || ||| || || || || |||| ||||||| |||||||| |||| || Sbjct 23040 ACGGCGAGCCTCCGGCGTGGGATAGTAGTTGACGTCGATGATGCGGTTCAAGTTATACGC 23099 Query 78984 GACGACCCGAGTCACCTC--GTACAATTTGGCGAAATCAAAATGAT--TTCCTTTGATGA 79039 || ||| |||||||| | | ||||| || | || ||| ||| | |||| Sbjct 23100 CACAACCTTGGTCACCTCACGAAGCTTTTGG--AAGTTGAACTGACCGTTC--TCGATGT 23155 Query 79040 AAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCT 79099 | ||||| ||| | ||| ||||||||||| || || |||||||| || ||| || Sbjct 23156 ACGTCGGCAGGGCAATCGAGGCCAGGTTGCAGACAGCAGTCTCGTCGGGCGAAGAGTACT 23215 Query 79100 CGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCT 79159 ||||||| || ||||| | ||||| ||||||||||| || | ||| || |||||| || Sbjct 23216 CGATGATCTCAGTGCAGAGGTTAGAAGACTTGATGGTTCCAAGGTTTTTTTGGTTGGACT 23275 Query 79160 TCTCGTTACAGG 79171 | | |||||| Sbjct 23276 TGGCTGTACAGG 23287 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 79387 AAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCC 79446 ||||| || | |||||| || || ||| | || ||| ||| | | ||| | ||| Sbjct 23612 AAGAGATCAGAGATCCAGAGAGCATAGAACAAATCACGGGCACGTAGTTGCTCTTTGCCA 23671 Query 79447 TGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATG 79506 || ||| | || ||||| || || | |||||| ||||||| ||||| || ||||| Sbjct 23672 TGATTCTTCCTCAAGTCGAGGAACTCGAAGATGTCATCGTGCCATGGCTCAAGGTAGATA 23731 Query 79507 GCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAA 79566 || |||| || |||||| ||||||||||| |||||| || || ||| | | Sbjct 23732 GCAAACGCTCCGGGACGCTTGTTGCCGCCCTGGTCGACGTAACGAGCAGTGGCATCATAT 23791 Query 79567 ACTCGGAGCATGGGCACGATGCCGT 79591 |||| |||||||| |||||||||| Sbjct 23792 GCTCGTAGCATGGGGACGATGCCGT 23816 >seq2640 Length=24278 Score = 129 bits (142), Expect = 6e-25 Identities = 351/530 (66%), Gaps = 12/530 (2%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||||||||| || | ||| |||||| | | |||||||| |||||| | |||| Sbjct 17063 TGTATAAGAAGGCCGAAGCTTCTTTCTGGACTGCTGAGGAGATGGACCTCTCTAAGGACC 17122 Query 59653 TGAAGGATTGGG---ACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGG 59709 || | || ||| ||||| | ||| || |||| | || || ||| ||||||| Sbjct 17123 TGCACGACTGGACGAACAAGATGAATGACAACGAACGTCACTTTATCTCTCACGTCCTGG 17182 Query 59710 CCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTC--CAA 59767 | |||||||| || || || || || | || || | | ||| | |||| ||| Sbjct 17183 CTTTCTTCGCTGCTTCGGACGGTATCGTAAATGAGAACCTCGT--TGAGCGTTTCTCCAA 17240 Query 59768 GGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTAT 59827 || || || || ||||| || | ||||||| | ||| | | ||| || Sbjct 17241 CGAAGTTCAAGCAGCGGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGATGGAGAACAT 17300 Query 59828 CCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGC 59887 |||||| ||||| |||||||| | ||||||| | | ||| || | ||| | Sbjct 17301 CCACTCAGAGACATACTCGCTACTCATCGATACATACATTCGGGACCCCGCCGAGCGTAC 17360 Query 59888 TGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCA 59946 | |||||| ||| | ||||| | || ||| | || | || || || ||||| Sbjct 17361 CCGACTGTTCGATGCTGTCGAGACTATTCCATGCA-TCAAGCGTAAGGCCGATTGGGCAC 17419 Query 59947 TGCAGTGGATGA--GTCCTGGAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGCG 60003 || ||||||| | | | || || | ||||| | ||||| | || || || | Sbjct 17420 TGAAGTGGATTTCCGACAAGCAGTCAACCTTTGCCGAGCGTCTAGTTGCCTTCGCCGCTG 17479 Query 60004 TGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCC 60063 |||| || ||||||||||||||||| ||| |||||| |||||| | ||||||||||| | Sbjct 17480 TGGAGGGTATCTTCTTCTCTGGCTCCTTCGCTGCTATCTTCTGGATGAAAAAGCGTGGTC 17539 Query 60064 TCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 | ||||| || || | ||||||||||| || || ||| || || ||| Sbjct 17540 TTATGCCCGGTCTTACCTTCTCCAACGAACTTATCAGCCGTGATGAAGGC 17589 >seq1717 Length=72410 Score = 122 bits (134), Expect = 1e-22 Identities = 337/511 (66%), Gaps = 12/511 (2%) Strand=Plus/Plus Query 59612 TTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGG---ACAA 59668 ||| |||||| | | ||| ||||| |||||| | || ||| | || ||| ||| Sbjct 62359 TTCTTTCTGGACTGCCGAAGAGATGGACCTCTCTAAGGATCTGCACGACTGGACGAACAG 62418 Query 59669 GCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGA 59728 | | ||| || |||||| ||||| ||| || ||||| ||||| || || || Sbjct 62419 GATGAATGACAACGAGCGTCATTTTATCTCCCACGTTCTGGCTTTCTTTGCTGCTTCGGA 62478 Query 59729 TGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGC 59788 || || || | || || | | | || ||||| || || ||| || ||||| Sbjct 62479 CGGTATCGTAAATGAGAACCTCGTAGAGCGTTTCTCCAACGAAGTTCAGGCAGCGGAGGC 62538 Query 59789 CCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCT 59848 || | ||||||| | ||| | | ||| |||||||| ||||| |||||||| Sbjct 62539 TCGTTGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCAGAGACATACTCGCT 62598 Query 59849 CATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGA 59908 | ||||||| | | ||| || | ||| | | |||||| ||| | || Sbjct 62599 ACTCATCGATACATACATTCGGGACCCCGCCGAGCGTACCCGACTGTTCGATGCTGTCGA 62658 Query 59909 GACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGGA- 59966 ||| | || ||| | |||| || || || ||||| || ||||||| ||| | Sbjct 62659 GACTATTCCATGCA-TCAAACGTAAGGCGGATTGGGCACTGAAGTGGATT--TCCGACAA 62715 Query 59967 GCAT----CATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTC 60022 ||| | ||||| | ||||| | || || || ||||| || ||||||||||| Sbjct 62716 GCAATCGACCTTTGCCGAGCGTCTGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTC 62775 Query 60023 TGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTT 60082 ||| || ||| ||| || |||||| | || ||||||||||||||||| || || | ||| Sbjct 62776 TGGTTCCTTCGCTGCCATCTTCTGGATGAAGAAGCGTGGCCTCATGCCTGGTCTTACTTT 62835 Query 60083 CTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 |||||||||||| || ||| || |||||| Sbjct 62836 CTCCAACGAGCTCATCAGCCGTGATGAGGGC 62866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548463646341360