Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1790 95.1 1e-14 seq1576 95.1 1e-14 >seq1790 Length=20529 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 30187 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCCGA 30245 ||||||||| || || | || |||||||| || | || || || |||||||| || Sbjct 9980 CAGCTGATCTACACCTTTTCCAGAGTAGTCCGCATCGCAGGTG-GTATACTCTGCGCCCC 9922 Query 30246 AATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGC 30305 | |||| ||||||||| || || || || || || || || || |||||| | |||| Sbjct 9921 AGTGCCGCCACTGGAAACCATATACGGGCCCAAGATCGCCTTCACGTCTGTGCCC-AAGC 9863 Query 30306 CC-CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCA 30364 || | | |||||||| | | ||||| ||| ||||||||||||| || | ||| || Sbjct 9862 CCACGCGACTCCAAAAACGCCTTCGAACCATTGCCGTCCCAGATCTTAACACTCTTGGCA 9803 Query 30365 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30417 ||| | |||| |||| || | |||||||| | ||||||||| || Sbjct 9802 CTCAGCAAGGTAGAGTCCGTGGCTCCACGAACGAACCATATCAGCTCCTCAAC 9750 >seq1576 Length=108808 Score = 95.1 bits (104), Expect = 1e-14 Identities = 165/235 (70%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 30187 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCCGA 30245 ||||||||| || || | || |||||||| || | || || || || || || || Sbjct 23933 CAGCTGATCGACACCTTTTCCAGAGTAGTCCGCATCGCAGGTG-GTATATTCAGCGCCCC 23991 Query 30246 AATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGC 30305 | |||| ||||||||| || || || || || || || || || ||||| || |||| Sbjct 23992 AGTGCCGCCACTGGAAACCATATACGGGCCCAAGATCGCCTTCACGTCTGTG-TCCAAGC 24050 Query 30306 CC-CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCA 30364 || | | |||||||| | | ||||| ||| ||||||||||||| || ||||| || Sbjct 24051 CCACGCGACTCCAAAAATGCCTTCGAACCATTGCCGTCCCAGATCTTAACACCCTTGGCA 24110 Query 30365 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGA 30419 ||| |||||| |||| || | |||||||| | || |||||| |||| Sbjct 24111 CTCAGCAAGGTGGAGTCCGTGGCTCCACGAACGAACCATATCAACTCCTCAACGA 24165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406266233932548