Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq1997 91.5 2e-13 seq2601 82.4 9e-11 >seq1997 Length=55525 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 139378 CGAGCCATTTCGAGCCCACGGTTTATGTCAAATGAGCCATTCAATTCTGGGTCGTTAATG 139437 |||||| || || || ||||| || | || ||||||| || | ||| || |||||| Sbjct 10907 CGAGCCGTTCGAAGACCTCGGTTAATTTGGAAAGAGCCATCCATATTTGGATCATTAATG 10966 Query 139438 AAACCTTTCCAACCTACAGTTGTTCTTGGTTTCTCAAAATAAACACGCATAAC 139490 | ||||||||| |||||||| || | |||||| || |||||||||||||| || Sbjct 10967 AGACCTTTCCAGCCTACAGTCGTACGTGGTTTTTCGAAATAAACACGCATGAC 11019 >seq2601 Length=58851 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 139378 CGAGCCATTTCGAGCCCACGGTTTATGTCAAATGAGCCATTCAATTCTGGGTCGTTAATG 139437 |||||| || || || ||||| || | || ||||||| || | ||| |||||||| Sbjct 28049 CGAGCCGTTCGAAGACCTCGGTTGATTTGGAAAGAGCCATCCATGTTTGGATCGTTAATA 28108 Query 139438 AAACCTTTCCAACCTACAGTTGTTCTTGGTTTCTCAAAATAAACACGCATAAC 139490 | |||||||| ||||| || || | |||||| || |||||||||||||| || Sbjct 28109 AGGCCTTTCCAGCCTACGGTAGTGCGTGGTTTTTCGAAATAAACACGCATGAC 28161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568266238353720