Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1723 93.3 4e-14 seq1796 82.4 7e-11 >seq1723 Length=56463 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGG-CAAGTGTTCGTTCGTCATC 39134 |||||||| || ||| ||| || || || ||||| || | |||| || || |||| || Sbjct 44024 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGACAAG-GTACGCCCGTCCTC 43966 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| || || || || || ||||||||||| |||| ||| | || ||| ||||| Sbjct 43965 GAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCTTG 43906 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || |||| | | | || ||| |||||| || || | || ||| | || Sbjct 43905 GATCTTGGCCTTGACGTTATCAATGGTGTCGGACGACTCGACCTCAAGGGTAATAGTCTT 43846 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || || ||||| ||||| Sbjct 43845 GCCCGTCAGAGTCTTGACGAAGATCTGCAT 43816 >seq1796 Length=58898 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || || || || | || || || |||| |||||||| || || || || Sbjct 51305 TCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCGTCCTCAAGCTGCTTTCCGGCGAAA 51364 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || || ||||||||||||| || | | ||| || ||| ||| || |||| ||| Sbjct 51365 ATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTGGCCTTGA-CGTT 51423 Query 39214 G-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| || ||||| || |||| ||| ||| | || ||||| || ||||| || Sbjct 51424 GTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTACCCGTGAGGGTTTTGAC 51483 Query 39273 AAAGATTTGCAT 39284 ||| |||||||| Sbjct 51484 AAATATTTGCAT 51495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429498908259047