Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1796 149 1e-30 seq1723 149 1e-30 seq2729 138 3e-27 seq557 122 2e-22 seq1237 107 5e-18 seq4443 105 2e-17 seq540 105 2e-17 seq3251 95.1 3e-14 seq3955 93.3 1e-13 seq5794 84.2 5e-11 seq2790 84.2 5e-11 >seq1796 Length=58898 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||||| ||||| || || |||| ||||| || | ||| || | ||| || Sbjct 51740 AGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGCCCGTCC 51799 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || ||||| || ||||| ||||| || ||||||||| Sbjct 51800 TCAAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCGGGGGGAATGCCCTCCTTGTCT 51859 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| || | || || || | ||||| ||| Sbjct 51860 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGACGACTCAACCTCAAGGGTGATAGTC 51919 Query 225682 TTGCCCGTCAAAGTTTT 225698 |||||||||| |||||| Sbjct 51920 TTGCCCGTCAGAGTTTT 51936 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| ||||| || ||||| || || |||| |||||||| | | ||| Sbjct 51502 ACGCAGACGCAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGT 51561 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| || || ||||| || |||||||| || || || ||||| Sbjct 51562 GCGACCATCTTCGAGTTGCTTTCCGGCAAAGATCAGACGTTGTTGATCAGGGGGGATACC 51621 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || || |||||| ||| || ||||||||||| || | |||||| || | Sbjct 51622 CTCCTTATCCTGAATCTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCACTTCGAG 51681 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| || | || || | || | |||||| Sbjct 51682 AGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 51723 >seq1723 Length=56463 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || |||||||| || |||| |||||||| | | ||| Sbjct 44265 ACGCAGACGCAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGAAAGAGT 44206 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| || |||||||| || |||||||| || || || ||||| Sbjct 44205 GCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGTTGATCAGGGGGGATACC 44146 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || ||||| ||| ||| || ||||||||||| || | |||||| || | Sbjct 44145 CTCCTTATCCTGGATTTTTGCCTTAACGTTATCGATGGTGTCGGATGATTCCACTTCGAG 44086 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| || | || || | || | |||||| Sbjct 44085 GGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 44044 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||||| ||||| || || |||| || || || | ||| || | ||| || Sbjct 44027 AGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGACAAGGTACGCCCGTCC 43968 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| || || || || || ||||| ||||| || ||||||||| Sbjct 43967 TCGAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCT 43908 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| || | || || || | || || ||| Sbjct 43907 TGGATCTTGGCCTTGACGTTATCAATGGTGTCGGACGACTCGACCTCAAGGGTAATAGTC 43848 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||| ||| || | ||| | ||||| Sbjct 43847 TTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 43816 >seq2729 Length=38494 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582 || || |||| |||||| || | | || | || || || |||||||| ||||||||| Sbjct 352 TCCTTCTGGATATTGTAGTCAGAGAGCGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAG 293 Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642 || || || ||||||||||| ||||||||||||||||| |||||||| ||| ||| Sbjct 292 ATGAGACGCTGTTGGTCGGGGGGAATACCTTCCTTGTCCTGGATCTTCGCCTTGACATTA 233 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702 ||||| ||||| |||| || || || | ||||||||||| ||||| | ||| || | | Sbjct 232 TCGATCGTGTCAGAGGACTCGACCTCCAGGGTGATCGTCTTACCCGTGAGAGTCTTGACG 173 Query 225703 AACACTTGCAT 225713 || | ||||| Sbjct 172 AAGATCTGCAT 162 Score = 109 bits (120), Expect = 1e-18 Identities = 110/139 (79%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| |||||||| || || |||| ||||||||| | | ||| | || ||| Sbjct 145 AGGACAAGGTGAAGAGTGGACTCCTTCTGGATATTGTAATCCGAAAGAGTACGGCCGTCT 86 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT-ACCTTCCTTGTC 225620 || || ||||| || |||||||| || || ||||||||||| || || || |||||||| Sbjct 85 TCCAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGGCCCTCCTTGTC 26 Query 225621 TTGGATCTTTTG-CTTCAC 225638 || |||||| | |||||| Sbjct 25 TT-GATCTTCGGCCTTCAC 8 >seq557 Length=42797 Score = 122 bits (134), Expect = 2e-22 Identities = 149/201 (74%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| |||||||| || || |||| |||||||| | | ||| | || ||| Sbjct 23916 AGGACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCGTCT 23975 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCG----GGCGGAATACCTTCCTT 225617 || |||||||| || || ||||| || ||||| |||||| || ||| | ||||| Sbjct 23976 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGACGGGGGANNCGCCTCCTT 24035 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||| |||| | |||||| ||||| ||||| |||| || || || | |||||| Sbjct 24036 GTCTT-GATC-TGGCCTTCACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGCGTGAT 24093 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||||||||| | ||| || Sbjct 24094 GGTCTTGCCCGTGAGAGTCTT 24114 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| || ||| || || |||| || ||||||| | || | || || || ||||| Sbjct 23696 GTGAAGGGTGCTCTCCTTCTGGATGTTATAATCGGAGAGTGTGCGACCGTCCTCAAGCTG 23755 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || |||||||| || || ||||||||||| |||||||| ||||||||||||||||| Sbjct 23756 CTTGCCGGCGAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCTTGGATCTT 23815 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| ||| ||||| ||||| |||| || || || | || || ||||| ||||| Sbjct 23816 CGCCTTAACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGT 23875 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 | || || | ||| | ||||| Sbjct 23876 GAGGGTCTTGACGAAGATCTGCAT 23899 >seq1237 Length=1541 Score = 107 bits (118), Expect = 5e-18 Identities = 110/141 (78%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783 ||| || || || |||||| ||||| ||||| ||| ||||||||||||| ||||||||| Sbjct 1144 TATGTCAAGTGTAGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGC 1203 Query 7784 TTATAC-AATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTG 7842 || | | | |||||| || |||||||||||||||||||| |||| | | |||| | Sbjct 1204 TTGTGCGGGCCCCCCGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCG 1263 Query 7843 GAATA-TTTACGCGTTAGCTT 7862 | || || | |||||||||| Sbjct 1264 GTCTACTTAATGCGTTAGCTT 1284 >seq4443 Length=924 Score = 105 bits (116), Expect = 2e-17 Identities = 186/269 (69%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 7465 TTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCG 7524 ||| | ||||| || ||||| |||||| | | || || ||||||||| ||||||| Sbjct 476 TTTGCAGGTATGATTGGTACAGCTTTTTCTGTATTAATTAGATTAGAATTATCTGCTCCT 535 Query 7525 GGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCC 7584 || ||| | || || || |||| | | || || || ||||| || ||||| Sbjct 536 GGGGTACAATTTTTACAAGGAGATCACCAATTATTTAATGTAATAATTACAGCCCATGCT 595 Query 7585 TTTGTTATGATTTTCTTTTTTGTTATGCC--GGTTATGATAGGCGGTTTCGGAAATTGAT 7642 || | |||||||||||| | || ||||| ||||| |||| ||||| || || | | Sbjct 596 TTCATAATGATTTTCTTTATGGTAATGCCAGGGTTA--GTAGGAGGTTTTGGTAACTACT 653 Query 7643 TCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTT 7702 | | || || | || ||||||||||||||||| ||||| | || ||||| || Sbjct 654 TATTACCAGTACAAGTGGGAGCTCCTGATATGGCTTTCCCAAGATTAAATAATATCTCTT 713 Query 7703 TTTGATTACTACCGCCTTCCTTATTTCTA 7731 | || ||| |||| ||||| ||| || || Sbjct 714 TCTGGTTATTACCTCCTTCATTAATTTTA 742 >seq540 Length=16489 Score = 105 bits (116), Expect = 2e-17 Identities = 186/269 (69%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 7465 TTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCG 7524 ||| | ||||| || ||||| |||||| | | || || ||||||||| ||||||| Sbjct 4795 TTTGCAGGTATGATTGGTACAGCTTTTTCTGTATTAATTAGATTAGAATTATCTGCTCCT 4854 Query 7525 GGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCC 7584 || ||| | || || || |||| | | || || || ||||| || ||||| Sbjct 4855 GGGGTACAATTTTTACAAGGAGATCACCAATTATTTAATGTAATAATTACAGCCCATGCT 4914 Query 7585 TTTGTTATGATTTTCTTTTTTGTTATGCC--GGTTATGATAGGCGGTTTCGGAAATTGAT 7642 || | |||||||||||| | || ||||| ||||| |||| ||||| || || | | Sbjct 4915 TTCATAATGATTTTCTTTATGGTAATGCCAGGGTTA--GTAGGAGGTTTTGGTAACTACT 4972 Query 7643 TCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTT 7702 | | || || | || ||||||||||||||||| ||||| | || ||||| || Sbjct 4973 TATTACCAGTACAAGTGGGAGCTCCTGATATGGCTTTCCCAAGATTAAATAATATCTCTT 5032 Query 7703 TTTGATTACTACCGCCTTCCTTATTTCTA 7731 | || ||| |||| ||||| ||| || || Sbjct 5033 TCTGGTTATTACCTCCTTCATTAATTTTA 5061 Score = 93.3 bits (102), Expect = 1e-13 Identities = 106/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACT-CTCATATTAAATATCGTAGTAATAAA 371423 |||||||||||||| | || | | | | || | |||||||| |||| ||||||||||| Sbjct 6441 AATGGTAATTTATGTA-AGCTCATACCGTTAGTTCTCATATTTAATACAGTAGTAATAAA 6383 Query 371424 GTTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATC 371483 || ||||| |||| || ||||| | || || | |||| ||| || || |||||||| Sbjct 6382 ATTAATAGCACCTAATAGTGAAGAAACCCCAGCTAAGTGTAGACTGAAGATAGCTAAATC 6323 Query 371484 GACGGAACCGCCGGAGTGAG 371503 || ||||| || ||||||| Sbjct 6322 AACAGAACCACCTGAGTGAG 6303 >seq3251 Length=9849 Score = 95.1 bits (104), Expect = 3e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| || || ||||| ||||||| ||||| ||| | ||| Sbjct 7550 ACGAAGACGGAGCACAAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGCTGAGAGT 7491 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 | |||||||| |||||||| ||||||||||| || || || ||||| || ||||| Sbjct 7490 GCGTCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGAAT 7434 >seq3955 Length=1914 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/97 (84%), Gaps = 3/97 (3%) Strand=Plus/Minus Query 6767 TTGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCA 6824 ||||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||| Sbjct 159 TTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCA 101 Query 6825 GCAGTGGAGAATATTTGACAATGGGCGAAAGCTTGAT 6861 ||||||| ||||||| |||||||||| |||| |||| Sbjct 100 GCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT 64 >seq5794 Length=685 Score = 84.2 bits (92), Expect = 5e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || || ||||| || || | |||||| ||| | || | |||||| Sbjct 308 AGGACAAGGTGAAGGGTAGATTCCTTCTGAATATTGTAGTCGCTAAGGGTACGGCCATCT 249 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 || || ||||| ||||| ||||| | |||||| |||||||| || |||| Sbjct 248 TCAAGTTGCTTGCCAGCAAAGATCAATCGTTGCTGGTCGGGAGGGATAC 200 >seq2790 Length=23748 Score = 84.2 bits (92), Expect = 5e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || || ||||| || || | |||||| ||| | || | |||||| Sbjct 8432 AGGACAAGGTGAAGGGTAGATTCCTTCTGAATATTGTAGTCGCTAAGGGTACGGCCATCT 8491 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 || || ||||| ||||| ||||| | |||||| |||||||| || |||| Sbjct 8492 TCAAGTTGCTTGCCAGCAAAGATCAATCGTTGCTGGTCGGGAGGGATAC 8540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192394923869786