Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1790 82.4 6e-11 >seq1790 Length=20529 Score = 82.4 bits (90), Expect = 6e-11 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 27453 CAGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTGTACTCTGCTCCGA 27511 ||||||||| || || | || |||||||| | | || || || |||||||| || Sbjct 9980 CAGCTGATCTACACCTTTTCCAGAGTAGTCCGCATCGCAGGTG-GTATACTCTGCGCCCC 9922 Query 27512 AATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGC 27571 | |||| ||| ||||| || || || || || || || || || |||||| | |||| Sbjct 9921 AGTGCCGCCACTGGAAACCATATACGGGCCCAAGATCGCCTTCACGTCTGTGCCC-AAGC 9863 Query 27572 CC-CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 27630 || | | |||||||| | | ||||| ||| ||||||||||||| || | ||| | Sbjct 9862 CCACGCGACTCCAAAAACGCCTTCGAACCATTGCCGTCCCAGATCTTAACACTCTTGGCA 9803 Query 27631 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 27683 ||| | |||| |||| || | |||||||| | ||||||||| || Sbjct 9802 CTCAGCAAGGTAGAGTCCGTGGCTCCACGAACGAACCATATCAGCTCCTCAAC 9750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369467034451889