Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq557 163 2e-35 seq1796 161 7e-35 seq1723 149 5e-31 seq2472 84.2 2e-11 >seq557 Length=42797 Score = 163 bits (180), Expect = 2e-35 Identities = 161/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 44130 CCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCA 44189 ||| |||||| ||||||||||| |||||||| ||||||| |||| ||| |||| || | Sbjct 23692 CCAAGTGAAGGGTGCTCTCCTTCTGGATGTTATAATCGGAGAGTGTGCGACCGTCCTCAA 23751 Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249 ||||||| ||||| ||||| | |||||| || || | || | ||| ||||| || | Sbjct 23752 GCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCTTGGA 23811 Query 44250 TCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 ||||| ||| | | | || ||||||| ||| || ||||||| ||||| ||||| | Sbjct 23812 TCTTCGCCTTAACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTAC 23871 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||||| |||||||| ||||| Sbjct 23872 CCGTGAGGGTCTTGACGAAGATCTGCAT 23899 Score = 116 bits (128), Expect = 3e-21 Identities = 156/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| |||||| |||||||||||||| | || ||| |||| || Sbjct 23919 ACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGACCGTCTTCG 23978 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA---GGCACAC-CTTCCTTTTC 44244 |||||||| ||||||||||| | ||| ||||| || | | || | | | ||||| | Sbjct 23979 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGACGGGGGANNCGCCTCCTTGT- 24037 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | | ||| | ||||| | | || ||||||| ||| || ||||| | ||| || || Sbjct 24038 CTTGATC-TGGCCTTCACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGCGTGATGGT 24096 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||||||| ||||| || ||||| ||||| Sbjct 24097 CTTGCCCGTGAGAGTCTTGACAAAGATCTGCAT 24129 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| ||||| |||||||| | ||| ||| |||| || Sbjct 24149 ACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCCGAGAGGGTGCGACCGTCCTCG 24208 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 |||||||| || || |||||||| ||||||||||| | ||| Sbjct 24209 AGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGATCGGGAGG 24249 >seq1796 Length=58898 Score = 161 bits (178), Expect = 7e-35 Identities = 181/238 (76%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | ||| | || || |||||||| ||| |||||| |||||||| Sbjct 51487 TATTTGCATGCCACCACGCAGACGCAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTT 51546 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 |||||| | || ||| | || || || ||||| ||||||||||||| ||| || || Sbjct 51547 GTAATCCGAAAGAGTGCGACCATCTTCGAGTTGCTTTCCGGCAAAGATCAGACGTTGTTG 51606 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGG 44279 ||| | || | ||| ||||| ||| ||||| ||| | || ||| | |||||||||| Sbjct 51607 ATCAGGGGGGATACCCTCCTTATCCTGAATCTT-TGCCTTAACGTTATCGATGGTGTCGG 51665 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || | || |||||||| || |||||||||||||| ||||||||||| Sbjct 51666 ATGATTCCACTTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 51723 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44130 CCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCA 44189 |||| ||||| || ||||| || |||||||| || | || || |||| || | Sbjct 51288 CCAGATGAAGAGTCGATTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCGTCCTCAA 51347 Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249 ||||||| ||||| || || | |||||||| || | ||| | ||| ||||| ||| | Sbjct 51348 GCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGA 51407 Query 44250 TCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 |||| ||| | | | || ||||| | || || ||||||| |||||| ||||| | Sbjct 51408 TCTTGGCCTTGACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTAATAGTCTTAC 51467 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||| || || || ||||||||| Sbjct 51468 CCGTGAGGGTTTTGACAAATATTTGCATG 51496 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC-GGCGAGTTGGCGCTCGTCGTC 44187 |||| || || ||| |||||| ||||||||||| || | | || | ||| |||| || Sbjct 51743 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGT-ACGCCCGTCCTC 51801 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||| | ||| |||||||| | || | || ||||| || Sbjct 51802 AAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGATCGGGGGGAATGCCCTCCTTGTCTTG 51861 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | |||||||||| || || ||||| | || || ||||| Sbjct 51862 GATCTTGGCCTTGACGTTGTCAATGGTGTCGGACGACTCAACCTCAAGGGTGATAGTCTT 51921 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || || || ||||| ||||| Sbjct 51922 GCCCGTCAGAGTTTTGACAAAGATCTGCAT 51951 >seq1723 Length=56463 Score = 149 bits (164), Expect = 5e-31 Identities = 178/238 (75%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | ||| | || || |||||||| ||| ||||| |||||||| Sbjct 44280 TATTTGCATACCACCACGCAGACGCAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTT 44221 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 |||||| | || ||| | || || || ||||| ||||| ||||||| ||| || || Sbjct 44220 GTAATCCGAAAGAGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGTTG 44161 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGG 44279 ||| | || | ||| ||||| ||| || || ||| | || ||| | |||||||||| Sbjct 44160 ATCAGGGGGGATACCCTCCTTATCCTGGATTTT-TGCCTTAACGTTATCGATGGTGTCGG 44102 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || | || |||||||| || |||||||||||||| ||||||||||| Sbjct 44101 ATGATTCCACTTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 44044 Score = 118 bits (130), Expect = 8e-22 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 44130 CCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCA 44189 |||| ||||| || |||||| || |||||||| || | || || | || || | Sbjct 44479 CCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAGCGTACGACCATCCTCAA 44420 Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249 ||||||| ||||| || || | |||||||| || | ||| | ||| ||||| ||| | Sbjct 44419 GCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGA 44360 Query 44250 TCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 |||| ||||| | | || ||||| | || || ||||||| ||| || ||||| | Sbjct 44359 TCTTGGCCTTCACGTTGTCGATCGTGTCTGATGACTCGACCTCCAACGTGATGGTCTTAC 44300 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||||| ||||| |||||||| Sbjct 44299 CCGTGAGGGTCTTGACGAATATTTGCAT 44272 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 |||| || || ||| |||||| |||||||| || || | | || | ||| |||| || Sbjct 44024 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGACAAGGTA-CGCCCGTCCTC 43966 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || || || | |||||||||||| | || | || ||||| || Sbjct 43965 GAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCTTG 43906 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | |||||||||| || || ||||| | ||||| ||||| Sbjct 43905 GATCTTGGCCTTGACGTTATCAATGGTGTCGGACGACTCGACCTCAAGGGTAATAGTCTT 43846 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || ||||| |||||||| ||||| Sbjct 43845 GCCCGTCAGAGTCTTGACGAAGATCTGCAT 43816 >seq2472 Length=20097 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| ||||||||||| |||| ||| ||| | || || Sbjct 110 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 169 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 |||||||| || || |||||||| ||||||||||| | ||| Sbjct 170 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCGGGAGG 210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359951268931023